Literature DB >> 14690245

Effects of macromolecular crowding on the unfolding and the refolding of D-glyceraldehyde-3-phosophospate dehydrogenase.

Guoping Ren1, Zong Lin, Chen-lu Tsou, Chih-chen Wang.   

Abstract

The effects of crowding agents, polyethylene glycol (PEG 20K), Dextran 70, and bovine serum albumin, on the denaturation of homotetrameric D-glyceraldehyde-3-phosphate dehydrogenase (GAPDH, EC 1.2.1.12) in 0.5 M guanidine hydrochloride and the reactivation of the fully denatured enzyme have been examined quantitatively. Increasing the concentration of PEG 20K to 225 mg/ml decreases the rate constant of slow phase of GAPDH inactivation to 5% but with no change for the fast phase. Chaperone GroEL assists GAPDH refolding greatly and shows even higher efficiency under crowding condition. Crowding mainly affects refolding steps after the formation of the dimeric folding intermediate.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14690245     DOI: 10.1023/b:jopc.0000005458.08802.11

Source DB:  PubMed          Journal:  J Protein Chem        ISSN: 0277-8033


  24 in total

Review 1.  The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media.

Authors:  A P Minton
Journal:  J Biol Chem       Date:  2001-02-15       Impact factor: 5.157

2.  Effects of macromolecular crowding on protein folding and aggregation.

Authors:  B van den Berg; R J Ellis; C M Dobson
Journal:  EMBO J       Date:  1999-12-15       Impact factor: 11.598

Review 3.  Implications of macromolecular crowding for protein assembly.

Authors:  A P Minton
Journal:  Curr Opin Struct Biol       Date:  2000-02       Impact factor: 6.809

4.  Direct observation of the enhancement of noncooperative protein self-assembly by macromolecular crowding: indefinite linear self-association of bacterial cell division protein FtsZ.

Authors:  G Rivas; J A Fernández; A P Minton
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

5.  Excluded volume effects on the refolding and assembly of an oligomeric protein. GroEL, a case study.

Authors:  A Galan; B Sot; O Llorca; J L Carrascosa; J M Valpuesta; A Muga
Journal:  J Biol Chem       Date:  2001-01-12       Impact factor: 5.157

6.  Macromolecular crowding perturbs protein refolding kinetics: implications for folding inside the cell.

Authors:  B van den Berg; R Wain; C M Dobson; R J Ellis
Journal:  EMBO J       Date:  2000-08-01       Impact factor: 11.598

7.  Effects of macromolecular crowding on the refolding of glucose- 6-phosphate dehydrogenase and protein disulfide isomerase.

Authors:  J Li; S Zhang; C Wang
Journal:  J Biol Chem       Date:  2001-07-09       Impact factor: 5.157

8.  A stable cold folding intermediate of rabbit muscle D-glyceraldehyde 3-phosphate dehydrogenase.

Authors:  N X Zhang; C Wang
Journal:  Eur J Biochem       Date:  1999-09

9.  "Half of the sites" binding of D-glyceraldehyde-3-phosphate dehydrogenase folding intermediate with GroEL.

Authors:  J Li; C C Wang
Journal:  J Biol Chem       Date:  1999-04-16       Impact factor: 5.157

10.  High concentrations of D-glyceraldehyde-3-phosphate dehydrogenase stabilize the enzyme against denaturation by low concentrations of GuHCl.

Authors:  Z Lin; C C Wang; C L Tsou
Journal:  Biochim Biophys Acta       Date:  2000-09-29
View more
  8 in total

1.  Serum albumin prevents protein aggregation and amyloid formation and retains chaperone-like activity in the presence of physiological ligands.

Authors:  Thomas E Finn; Andrea C Nunez; Margaret Sunde; Simon B Easterbrook-Smith
Journal:  J Biol Chem       Date:  2012-05-01       Impact factor: 5.157

2.  Enhancement of tunability of MAPK cascade due to coexistence of processive and distributive phosphorylation mechanisms.

Authors:  Jianqiang Sun; Ming Yi; Lijian Yang; Wenbin Wei; Yiming Ding; Ya Jia
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

3.  Guiding protein aggregation with macromolecular crowding.

Authors:  Larissa A Munishkina; Atta Ahmad; Anthony L Fink; Vladimir N Uversky
Journal:  Biochemistry       Date:  2008-07-30       Impact factor: 3.162

4.  Chaperone-like properties of tobacco plastid thioredoxins f and m.

Authors:  Ruth Sanz-Barrio; Alicia Fernández-San Millán; Jon Carballeda; Patricia Corral-Martínez; José M Seguí-Simarro; Inmaculada Farran
Journal:  J Exp Bot       Date:  2011-09-23       Impact factor: 6.992

Review 5.  What macromolecular crowding can do to a protein.

Authors:  Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2014-12-12       Impact factor: 5.923

6.  An optimised system for refolding of human glucose 6-phosphate dehydrogenase.

Authors:  Xiao-Tao Wang; Paul C Engel
Journal:  BMC Biotechnol       Date:  2009-03-11       Impact factor: 2.563

7.  The stability and formation of native proteins from unfolded monomers is increased through interactions with unrelated proteins.

Authors:  Claudia Rodríguez-Almazán; Francisco J Torner; Miguel Costas; Ruy Pérez-Montfort; Marieta Tuena de Gómez-Puyou; Armando Gómez Puyou
Journal:  PLoS One       Date:  2007-06-06       Impact factor: 3.240

8.  Carbohydrate-Based Macromolecular Crowding-Induced Stabilization of Proteins: Towards Understanding the Significance of the Size of the Crowder.

Authors:  Sumra Shahid; Ikramul Hasan; Faizan Ahmad; Md Imtaiyaz Hassan; Asimul Islam
Journal:  Biomolecules       Date:  2019-09-12
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.