Literature DB >> 14682945

Free energy of liquid water on the basis of quasichemical theory and ab initio molecular dynamics.

D Asthagiri1, Lawrence R Pratt, J D Kress.   

Abstract

We use ab initio molecular dynamics as a basis for quasichemical theory evaluation of the free energy of water near conventional liquid thermodynamic states. The Perdew-Wang-91 (PW91), Perdew-Burke-Ernzerhof (PBE), and revised PBE (rPBE) functionals are employed. The oxygen radial density distribution using the rPBE functional is in reasonable agreement with current experiments, whereas the PW91 and PBE functionals predict a more structured oxygen radial density distribution. The diffusion coefficient with the rPBE functional is in reasonable accord with experiments. Using a maximum entropy procedure, we obtain x0 from the coordination number distribution xn for oxygen atoms having n neighbors. Likewise, we obtain p0 from pn, the probability of observing cavities of specified radius containing n water molecules. The probability x0 is a measure of the local chemical interactions and is central to the quasichemical theory of solutions. The probability p0, central to the theory of liquids, is a measure of the free energy required to open cavities of defined sizes in the solvent. Using these values and a reasonable model for electrostatic and dispersion effects, the hydration free energy of water in water at 314 K is calculated to be -5.1 kcal/mole with the rPBE functional, in encouraging agreement with the experimental value of -6.1 kcal/mole.

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Year:  2003        PMID: 14682945     DOI: 10.1103/PhysRevE.68.041505

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  7 in total

1.  Ab initio molecular dynamics and quasichemical study of H+(aq).

Authors:  D Asthagiri; L R Pratt; J D Kress
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-14       Impact factor: 11.205

Review 2.  Proton solvation and transport in aqueous and biomolecular systems: insights from computer simulations.

Authors:  Jessica M J Swanson; C Mark Maupin; Hanning Chen; Matt K Petersen; Jiancong Xu; Yujie Wu; Gregory A Voth
Journal:  J Phys Chem B       Date:  2007-04-13       Impact factor: 2.991

3.  A theoretical study of aqueous solvation of K comparing ab initio, polarizable, and fixed-charge models.

Authors:  Troy W Whitfield; Sameer Varma; Edward Harder; Guillaume Lamoureux; Susan B Rempe; Benoît Roux
Journal:  J Chem Theory Comput       Date:  2007       Impact factor: 6.006

4.  Quantifying density fluctuations in volumes of all shapes and sizes using indirect umbrella sampling.

Authors:  Amish J Patel; Patrick Varilly; David Chandler; Shekhar Garde
Journal:  J Stat Phys       Date:  2011-10-01       Impact factor: 1.548

5.  Explicitly representing the solvation shell in continuum solvent calculations.

Authors:  Eirik F da Silva; Hallvard F Svendsen; Kenneth M Merz
Journal:  J Phys Chem A       Date:  2009-06-04       Impact factor: 2.781

Review 6.  Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.

Authors:  Charlotte I Lynch; Shanlin Rao; Mark S P Sansom
Journal:  Chem Rev       Date:  2020-08-25       Impact factor: 60.622

7.  A Comparison of QM/MM Simulations with and without the Drude Oscillator Model Based on Hydration Free Energies of Simple Solutes.

Authors:  Gerhard König; Frank C Pickard; Jing Huang; Walter Thiel; Alexander D MacKerell; Bernard R Brooks; Darrin M York
Journal:  Molecules       Date:  2018-10-19       Impact factor: 4.411

  7 in total

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