Literature DB >> 14680375

Identification and characterization of a series of nucleoside adducts formed by the reaction of 2'-deoxyguanosine and 1,2,3,4-diepoxybutane under physiological conditions.

Xin-Yu Zhang1, Adnan A Elfarra.   

Abstract

The carcinogenicity of 1,3-butadiene (BD) has been attributed to its in vivo metabolites, 3,4-epoxy-1-butene (EB) and 1,2,3,4-diepoxybutane (DEB). In this study, DEB was demonstrated to react with 2'-deoxyguanosine (dG) under in vitro physiological conditions (pH 7.4, 37 degrees C) to yield several pairs of diastereomeric adducts, including N-(2-hydroxy-1-oxiranylethyl)-2'-deoxyguanosine (P4-1 and P4-2), 7,8-dihydroxy-3-(2-deoxy-beta-d-erythro-pentofuranosyl)-3,5,6,7,8,9-hexahydro-1,3-diazepino[1,2-a]purin-11(11H)one (P6), 1-(2-hydroxy-2-oxiranylethyl)-2'-deoxyguanosine (P8 and P9), 1-[3-chloro-2-hydroxy-1-(hydroxymethyl)propyl]-2'-deoxyguanosine (1AP9 and 2AP9), and 4,8-dihydroxy-1-(2-deoxy-beta-d-erythro-pentofuranosyl)-9-hydroxymethyl-6,7,8,9-tetrahydro-1H-pyrimido[2,1-b]purinium ion (1BP4 and 2BP4). The 7-alkylation dG adducts (P5 and P5') were not characterized directly by NMR spectrometry because of their instability. However, their formula weights were determined to be 354, and their acid hydrolysis products were characterized as 2-amino-7-(3-chloro-2,4-dihydroxybutyl)-1,7-dihydro-6H-purin-6-one (H3), consistent with the structures of P5 and P5' being diastereomers of 6-oxo-2-amino-9-(2-deoxy-beta-d-erythro-pentofuranosyl)-7-(2-hydroxy-2-oxiranylethyl)-6,9-dihydro-1H-purinium ion. Time-course experiments indicated that alkaline pH and/or high DEB:dG molar ratios made the reactions faster without changing the adduct profile. The adducts were detected in the following chronological order: 7- (P5 and P5'), 1- (P8 and P9), N(2)- (P4-1 and P4-2), and P6. Whereas P4-1, P4-2, and P6 appeared stable during the courses of the reactions, P5, P5', P8, and P9 were labile and completely decomposed by the time dG was fully consumed. These results may contribute to a better understanding of the chemical reactivity and strong mutagenicity and carcinogenicity of DEB.

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Year:  2003        PMID: 14680375     DOI: 10.1021/tx0341355

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  9 in total

1.  Formation of fused-ring 2'-deoxycytidine adducts from 1-chloro-3-buten-2-one, an in vitro 1,3-butadiene metabolite, under in vitro physiological conditions.

Authors:  Liang Sun; Avishay Pelah; Dong-Ping Zhang; Yu-Fang Zhong; Jing An; Ying-Xin Yu; Xin-Yu Zhang; Adnan A Elfarra
Journal:  Chem Res Toxicol       Date:  2013-09-25       Impact factor: 3.739

2.  DNA oligomers containing site-specific and stereospecific exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, characterization, and effects on DNA structure.

Authors:  Uthpala Seneviratne; Sergey Antsypovich; Danae Quirk Dorr; Thakshila Dissanayake; Srikanth Kotapati; Natalia Tretyakova
Journal:  Chem Res Toxicol       Date:  2010-09-27       Impact factor: 3.739

3.  Reaction of 1,2,3,4-diepoxybutane with 2'-deoxyguanosine: initial products and their stabilities and decomposition patterns under physiological conditions.

Authors:  Xin-Yu Zhang; Adnan A Elfarra
Journal:  Chem Res Toxicol       Date:  2005-08       Impact factor: 3.739

Review 4.  Chemistry and structural biology of DNA damage and biological consequences.

Authors:  Michael P Stone; Hai Huang; Kyle L Brown; Ganesh Shanmugam
Journal:  Chem Biodivers       Date:  2011-09       Impact factor: 2.408

5.  Base Excision Repair of N6-Deoxyadenosine Adducts of 1,3-Butadiene.

Authors:  Susith Wickramaratne; Douglas M Banda; Shaofei Ji; Amelia H Manlove; Bhaskar Malayappan; Nicole N Nuñez; Leona Samson; Colin Campbell; Sheila S David; Natalia Tretyakova
Journal:  Biochemistry       Date:  2016-10-21       Impact factor: 3.162

6.  Characterization of 1,2,3,4-diepoxybutane-2'-deoxyguanosine cross-linking products formed at physiological and nonphysiological conditions.

Authors:  Xin-Yu Zhang; Adnan A Elfarra
Journal:  Chem Res Toxicol       Date:  2006-04       Impact factor: 3.739

7.  Polymerase Bypass of N(6)-Deoxyadenosine Adducts Derived from Epoxide Metabolites of 1,3-Butadiene.

Authors:  Srikanth Kotapati; Susith Wickramaratne; Amanda Esades; Emily J Boldry; Danae Quirk Dorr; Matthew G Pence; F Peter Guengerich; Natalia Y Tretyakova
Journal:  Chem Res Toxicol       Date:  2015-07-06       Impact factor: 3.739

8.  Exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, structural elucidation, and mechanistic studies.

Authors:  Uthpala Seneviratne; Sergey Antsypovich; Melissa Goggin; Danae Quirk Dorr; Rebecca Guza; Adam Moser; Carrie Thompson; Darrin M York; Natalia Tretyakova
Journal:  Chem Res Toxicol       Date:  2010-01       Impact factor: 3.739

Review 9.  1,3-Butadiene: a ubiquitous environmental mutagen and its associations with diseases.

Authors:  Wan-Qi Chen; Xin-Yu Zhang
Journal:  Genes Environ       Date:  2022-01-10
  9 in total

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