Literature DB >> 14677968

Active species of horseradish peroxidase (HRP) and cytochrome P450: two electronic chameleons.

Sam P de Visser1, Sason Shaik, Pankaz K Sharma, Devesh Kumar, Walter Thiel.   

Abstract

The active site of HRP Compound I (Cpd I) is modeled using hybrid density functional theory (UB3LYP). The effects of neighboring amino acids and of environmental polarity are included. The low-lying states have porphyrin radical cationic species (Por(*)(+)). However, since the Por(*)(+) species is a very good electron acceptor, other species, which can be either the ligand or side chain amino acid residues, may participate in electron donation to the Por(*)(+) moiety, thereby making Cpd I behave like a chemical chameleon. Thus, this behavior that was noted before for Cpd I of P450 is apparently much more wide ranging than initially appreciated. Since chemical chameleonic behavior property was found to be expressed not only in the properties of Cpd I itself, but also in its reactivity, the roots of this phenomenon are generalized. A comparative discussion of Cpd I species follows for the enzymes HRP, CcP, APX, CAT (catalase), and P450.

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Year:  2003        PMID: 14677968     DOI: 10.1021/ja0380906

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  The intrinsic axial ligand effect on propene oxidation by horseradish peroxidase versus cytochrome P450 enzymes.

Authors:  Devesh Kumar; Sam P de Visser; Pankaz K Sharma; Etienne Derat; Sason Shaik
Journal:  J Biol Inorg Chem       Date:  2005-02-19       Impact factor: 3.358

2.  The axial ligand effect of oxo-iron porphyrin catalysts. How does chloride compare to thiolate?

Authors:  Sam P de Visser
Journal:  J Biol Inorg Chem       Date:  2005-12-06       Impact factor: 3.358

3.  Enzymatic degradation of A2E, a retinal pigment epithelial lipofuscin bisretinoid.

Authors:  Yalin Wu; Jilin Zhou; Nathan Fishkin; Bruce E Rittmann; Janet R Sparrow
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

4.  Pi-pi interaction between aromatic ring and copper-coordinated His81 imidazole regulates the blue copper active-site structure.

Authors:  Rehab F Abdelhamid; Yuji Obara; Yoshiko Uchida; Takamitsu Kohzuma; David M Dooley; Doreen E Brown; Hiroshi Hori
Journal:  J Biol Inorg Chem       Date:  2006-10-10       Impact factor: 3.358

5.  Singlet versus Triplet Reactivity in an Mn(V)-Oxo Species: Testing Theoretical Predictions Against Experimental Evidence.

Authors:  Tzuhsiung Yang; Matthew G Quesne; Heather M Neu; Fabián G Cantú Reinhard; David P Goldberg; Sam P de Visser
Journal:  J Am Chem Soc       Date:  2016-09-14       Impact factor: 15.419

6.  Regioselectivity of substrate hydroxylation versus halogenation by a nonheme iron(IV)-oxo complex: possibility of rearrangement pathways.

Authors:  Matthew G Quesne; Sam P de Visser
Journal:  J Biol Inorg Chem       Date:  2012-05-13       Impact factor: 3.358

7.  Oxygen-atom transfer reactivity of axially ligated Mn(V)-oxo complexes: evidence for enhanced electrophilic and nucleophilic pathways.

Authors:  Heather M Neu; Tzuhsiung Yang; Regina A Baglia; Timothy H Yosca; Michael T Green; Matthew G Quesne; Sam P de Visser; David P Goldberg
Journal:  J Am Chem Soc       Date:  2014-09-19       Impact factor: 15.419

8.  How Are Substrate Binding and Catalysis Affected by Mutating Glu127 and Arg161 in Prolyl-4-hydroxylase? A QM/MM and MD Study.

Authors:  Amy Timmins; Sam P de Visser
Journal:  Front Chem       Date:  2017-11-09       Impact factor: 5.221

9.  Product Distributions of Cytochrome P450 OleTJE with Phenyl-Substituted Fatty Acids: A Computational Study.

Authors:  Yen-Ting Lin; Sam P de Visser
Journal:  Int J Mol Sci       Date:  2021-07-02       Impact factor: 5.923

Review 10.  Challenging Density Functional Theory Calculations with Hemes and Porphyrins.

Authors:  Sam P de Visser; Martin J Stillman
Journal:  Int J Mol Sci       Date:  2016-04-07       Impact factor: 5.923

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