Literature DB >> 14676822

Human cytosolic sulfotransferase database mining: identification of seven novel genes and pseudogenes.

R R Freimuth1, M Wiepert, C G Chute, E D Wieben, R M Weinshilboum.   

Abstract

A total of 10 SULT genes are presently known to be expressed in human tissues. We performed a comprehensive genome-wide search for novel SULT genes using two different but complementary approaches, and developed a novel graphical display to aid in the annotation of the hits. Seven novel human SULT genes were identified, five of which were predicted to be pseudogenes, including two processed pseudogenes and three pseudogenes that contained introns. Those five pseudogenes represent the first unambiguous SULT pseudogenes described in any species. Expression-profiling studies were conducted for one novel gene, SULT6B1, and a series of alternatively spliced transcripts were identified in the human testis. SULT6B1 was also present in chimpanzee and gorilla, differing at only seven encoded amino-acid residues among the three species. The results of these database mining studies will aid in studies of the regulation of these SULT genes, provide insights into the evolution of this gene family in humans, and serve as a starting point for comparative genomic studies of SULT genes.

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Year:  2004        PMID: 14676822     DOI: 10.1038/sj.tpj.6500223

Source DB:  PubMed          Journal:  Pharmacogenomics J        ISSN: 1470-269X            Impact factor:   3.550


  27 in total

Review 1.  Sulfotransferase gene copy number variation: pharmacogenetics and function.

Authors:  S J Hebbring; A M Moyer; R M Weinshilboum
Journal:  Cytogenet Genome Res       Date:  2009-03-11       Impact factor: 1.636

2.  PharmGKB summary: pathways of acetaminophen metabolism at the therapeutic versus toxic doses.

Authors:  Liudmila L Mazaleuskaya; Katrin Sangkuhl; Caroline F Thorn; Garret A FitzGerald; Russ B Altman; Teri E Klein
Journal:  Pharmacogenet Genomics       Date:  2015-08       Impact factor: 2.089

3.  Sulphation of acetaminophen by the human cytosolic sulfotransferases: a systematic analysis.

Authors:  Akihiro Yamamoto; Ming-Yih Liu; Katsuhisa Kurogi; Yoichi Sakakibara; Yuichi Saeki; Masahito Suiko; Ming-Cheh Liu
Journal:  J Biochem       Date:  2015-06-11       Impact factor: 3.387

4.  Effect of SULT2B1 genetic polymorphisms on the sulfation of dehydroepiandrosterone and pregnenolone by SULT2B1b allozymes.

Authors:  Fatemah A Alherz; Amal A El Daibani; Maryam S Abunnaja; Ahsan F Bairam; Mohammed I Rasool; Yoichi Sakakibara; Masahito Suiko; Katsuhisa Kurogi; Ming-Cheh Liu
Journal:  Mol Cell Endocrinol       Date:  2019-08-07       Impact factor: 4.102

Review 5.  Updated perspectives on the cytosolic sulfotransferases (SULTs) and SULT-mediated sulfation.

Authors:  Masahito Suiko; Katsuhisa Kurogi; Takuyu Hashiguchi; Yoichi Sakakibara; Ming-Cheh Liu
Journal:  Biosci Biotechnol Biochem       Date:  2016-09-21       Impact factor: 2.043

6.  Expression of the orphan cytosolic sulfotransferase SULT1C3 in human intestine: characterization of the transcript variant and implications for function.

Authors:  Zofia Duniec-Dmuchowski; Elizabeth A Rondini; Zachary E Tibbs; Charles N Falany; Melissa Runge-Morris; Thomas A Kocarek
Journal:  Drug Metab Dispos       Date:  2013-12-11       Impact factor: 3.922

7.  Regulation of human cytosolic sulfotransferases 1C2 and 1C3 by nuclear signaling pathways in LS180 colorectal adenocarcinoma cells.

Authors:  Elizabeth A Rondini; Hailin Fang; Melissa Runge-Morris; Thomas A Kocarek
Journal:  Drug Metab Dispos       Date:  2013-12-11       Impact factor: 3.922

8.  On the role of genetic polymorphisms in the sulfation of cholesterol by human cytosolic sulphotransferase SULT2B1b.

Authors:  Fatemah A Alherz; Maryam S Abunnaja; Amal A El Daibani; Ahsan F Bairam; Mohammed I Rasool; Katsuhisa Kurogi; Yoichi Sakakibara; Masahito Suiko; Ming-Cheh Liu
Journal:  J Biochem       Date:  2018-09-01       Impact factor: 3.387

9.  Transcriptional Regulation of Human Cytosolic Sulfotransferase 1C3 by Peroxisome Proliferator-Activated Receptor γ in LS180 Human Colorectal Adenocarcinoma Cells.

Authors:  Sarah Dubaisi; Hailin Fang; Thomas A Kocarek; Melissa Runge-Morris
Journal:  Mol Pharmacol       Date:  2016-08-26       Impact factor: 4.436

10.  Regulation of sulfotransferase and UDP-glucuronosyltransferase gene expression by the PPARs.

Authors:  Melissa Runge-Morris; Thomas A Kocarek
Journal:  PPAR Res       Date:  2009-08-10       Impact factor: 4.964

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