Literature DB >> 14660406

Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis.

Marco Ventura1, Ralf Zink.   

Abstract

The relationship between Bifidobacterium lactis and Bifidobacterium animalis was examined by comparative analysis of tuf and recA gene sequences and by restriction fragment length polymorphism analysis of their internal 16S-23S transcribed spacer region sequences. The bifidobacterial strains investigated could be divided into two distinct groups within a single species based on the tuf, recA, and 16S-23S spacer region sequence analysis. Therefore, all strains of B. lactis and B. animalis could be unified as the species B. animalis and divided into two subspecies, Bifidobacterium animalis subsp. lactis and Bifidobacterium animalis subsp. animalis.

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Year:  2003        PMID： 14660406      PMCID： PMC310005          DOI： 10.1128/AEM.69.12.7517-7522.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  21 in total

1.  Networks and groups within the genus Neisseria: analysis of argF, recA, rho, and 16S rRNA sequences from human Neisseria species.

Authors:  N H Smith; E C Holmes; G M Donovan; G A Carpenter; B G Spratt
Journal:  Mol Biol Evol       Date:  1999-06       Impact factor: 16.240

2.  Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine.

Authors:  M J Kullen; L J Brady; D J O'Sullivan
Journal:  FEMS Microbiol Lett       Date:  1997-09-15       Impact factor: 2.742

3.  Comparison of partial tuf gene sequences for the identification of lactobacilli.

Authors:  Frederic Chavagnat; Monika Haueter; Juan Jimeno; Michael G Casey
Journal:  FEMS Microbiol Lett       Date:  2002-12-17       Impact factor: 2.742

4.  [Comparative studies on bifidobacteria isolated from the alimentary tract of man and animals (including descriptions of bifidobacterium thermophilum nov. spec. and bifidobacterium pseudolongum nov. spec)].

Authors:  T Mitsuoka
Journal:  Zentralbl Bakteriol Orig       Date:  1969-05

5.  Differences in the hybridization pattern of Bacillus subtilis genes coding for rDNA depend on the method of DNA preparation.

Authors:  R N Waterhouse; L A Glover
Journal:  Appl Environ Microbiol       Date:  1993-03       Impact factor: 4.792

6.  The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Authors:  Mark A Schell; Maria Karmirantzou; Berend Snel; David Vilanova; Bernard Berger; Gabriella Pessi; Marie-Camille Zwahlen; Frank Desiere; Peer Bork; Michele Delley; R David Pridmore; Fabrizio Arigoni
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

7.  Molecular microbial analysis of Bifidobacterium isolates from different environments by the species-specific amplified ribosomal DNA restriction analysis (ARDRA).

Authors:  M Ventura; M Elli; R Reniero; R Zink
Journal:  FEMS Microbiol Ecol       Date:  2001-07       Impact factor: 4.194

8.  Bifidobacterium lactis Meile et al. 1997 is a subjective synonym of Bifidobacterium animalis (Mitsuoka 1969) Scardovi and Trovatelli 1974.

Authors:  Y Cai; M Matsumoto; Y Benno
Journal:  Microbiol Immunol       Date:  2000       Impact factor: 1.955

9.  Comparative sequence analysis of a recA gene fragment brings new evidence for a change in the taxonomy of the Lactobacillus casei group.

Authors:  G E Felis; F Dellaglio; L Mizzi; S Torriani
Journal:  Int J Syst Evol Microbiol       Date:  2001-11       Impact factor: 2.747

10.  Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification.

Authors:  Marco Ventura; Carlos Canchaya; Valèrie Meylan; Todd R Klaenhammer; Ralf Zink
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792
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  19 in total

Review 1.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

2.  Quantification of human fecal bifidobacterium species by use of quantitative real-time PCR analysis targeting the groEL gene.

Authors:  Jana Junick; Michael Blaut
Journal:  Appl Environ Microbiol       Date:  2012-02-03       Impact factor: 4.792

3.  Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing.

Authors:  Marco Ventura; Ralf Zink; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2005-01       Impact factor: 4.792

4.  The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003.

Authors:  Marco Ventura; Ziding Zhang; Michelle Cronin; Carlos Canchaya; John G Kenny; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

5.  Exploring the diversity of the bifidobacterial population in the human intestinal tract.

Authors:  Francesca Turroni; Elena Foroni; Paola Pizzetti; Vanessa Giubellini; Angela Ribbera; Paolo Merusi; Patrizio Cagnasso; Barbara Bizzarri; Gian Luigi de'Angelis; Fergus Shanahan; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2009-01-23       Impact factor: 4.792

Review 6.  Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.

Authors:  Marco Ventura; Carlos Canchaya; Andreas Tauch; Govind Chandra; Gerald F Fitzgerald; Keith F Chater; Douwe van Sinderen
Journal:  Microbiol Mol Biol Rev       Date:  2007-09       Impact factor: 11.056

7.  Genetic and transcriptional organization of the clpC locus in Bifidobacterium breve UCC 2003.

Authors:  Marco Ventura; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

8.  Characterization of the serpin-encoding gene of Bifidobacterium breve 210B.

Authors:  Francesca Turroni; Elena Foroni; Mary O'Connell Motherway; Francesca Bottacini; Vanessa Giubellini; Aldert Zomer; Alberto Ferrarini; Massimo Delledonne; Ziding Zhang; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2010-03-26       Impact factor: 4.792

9.  Rapid discrimination of Bifidobacterium animalis subspecies by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Santiago Ruiz-Moyano; Nannan Tao; Mark A Underwood; David A Mills
Journal:  Food Microbiol       Date:  2011-12-26       Impact factor: 5.516

10.  Dissecting the Evolutionary Development of the Species Bifidobacterium animalis through Comparative Genomics Analyses.

Authors:  Gabriele Andrea Lugli; Walter Mancino; Christian Milani; Sabrina Duranti; Leonardo Mancabelli; Stefania Napoli; Marta Mangifesta; Alice Viappiani; Rosaria Anzalone; Giulia Longhi; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Appl Environ Microbiol       Date:  2019-03-22       Impact factor: 4.792
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