Literature DB >> 14659007

Toward an understanding of the structural basis of translation.

Joachim Frank1.   

Abstract

The recently solved X-ray crystal structures of the ribosome have provided opportunities for studying the molecular basis of translation with a variety of methods including cryo-electron microscopy - where maps give the first glimpses of ribosomal evolution - and fluorescence spectroscopy techniques.

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Year:  2003        PMID： 14659007      PMCID： PMC329409          DOI： 10.1186/gb-2003-4-12-237

Source DB:  PubMed          Journal:  Genome Biol        ISSN： 1474-7596            Impact factor:   13.583


  41 in total

1.  A comparison of the yeast and rabbit 80 S ribosome reveals the topology of the nascent chain exit tunnel, inter-subunit bridges and mammalian rRNA expansion segments.

Authors:  D G Morgan; J F Ménétret; M Radermacher; A Neuhof; I V Akey; T A Rapoport; C W Akey
Journal:  J Mol Biol       Date:  2000-08-11       Impact factor: 5.469

2.  A ratchet-like inter-subunit reorganization of the ribosome during translocation.

Authors:  J Frank; R K Agrawal
Journal:  Nature       Date:  2000-07-20       Impact factor: 49.962

3.  Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution.

Authors:  F Schluenzen; A Tocilj; R Zarivach; J Harms; M Gluehmann; D Janell; A Bashan; H Bartels; I Agmon; F Franceschi; A Yonath
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

4.  The structural basis of ribosome activity in peptide bond synthesis.

Authors:  P Nissen; J Hansen; N Ban; P B Moore; T A Steitz
Journal:  Science       Date:  2000-08-11       Impact factor: 47.728

Review 5.  The structural basis of large ribosomal subunit function.

Authors:  Peter B Moore; Thomas A Steitz
Journal:  Annu Rev Biochem       Date:  2003       Impact factor: 23.643

6.  Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy.

Authors:  Florence Tama; Mikel Valle; Joachim Frank; Charles L Brooks
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-23       Impact factor: 11.205

7.  X-ray crystal structures of the WT and a hyper-accurate ribosome from Escherichia coli.

Authors:  Antón Vila-Sanjurjo; William K Ridgeway; Veysel Seymaner; Wen Zhang; Steve Santoso; Kexin Yu; Jamie H Doudna Cate
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-09       Impact factor: 11.205

8.  Locking and unlocking of ribosomal motions.

Authors:  Mikel Valle; Andrey Zavialov; Jayati Sengupta; Urmila Rawat; Måns Ehrenberg; Joachim Frank
Journal:  Cell       Date:  2003-07-11       Impact factor: 41.582

9.  Periodic conformational changes in rRNA: monitoring the dynamics of translating ribosomes.

Authors:  N Polacek; S Patzke; K H Nierhaus; A Barta
Journal:  Mol Cell       Date:  2000-07       Impact factor: 17.970

10.  Study of the structural dynamics of the E coli 70S ribosome using real-space refinement.

Authors:  Haixiao Gao; Jayati Sengupta; Mikel Valle; Andrei Korostelev; Narayanan Eswar; Scott M Stagg; Patrick Van Roey; Rajendra K Agrawal; Stephen C Harvey; Andrej Sali; Michael S Chapman; Joachim Frank
Journal:  Cell       Date:  2003-06-13       Impact factor: 41.582
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  5 in total

1.  Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction.

Authors:  Xing Zhang; Ethan Settembre; Chen Xu; Philip R Dormitzer; Richard Bellamy; Stephen C Harrison; Nikolaus Grigorieff
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-31       Impact factor: 11.205

2.  Understanding ribosome assembly: the structure of in vivo assembled immature 30S subunits revealed by cryo-electron microscopy.

Authors:  Ahmad Jomaa; Geordie Stewart; Jaime Martín-Benito; Ryszard Zielke; Tracey L Campbell; Janine R Maddock; Eric D Brown; Joaquin Ortega
Journal:  RNA       Date:  2011-02-08       Impact factor: 4.942

3.  The structure of the 80S ribosome from Trypanosoma cruzi reveals unique rRNA components.

Authors:  Haixiao Gao; Maximiliano Juri Ayub; Mariano J Levin; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-12       Impact factor: 11.205

4.  A method for the alignment of heterogeneous macromolecules from electron microscopy.

Authors:  Maxim Shatsky; Richard J Hall; Steven E Brenner; Robert M Glaeser
Journal:  J Struct Biol       Date:  2008-12-30       Impact factor: 2.867

5.  Binding properties of YjeQ (RsgA), RbfA, RimM and Era to assembly intermediates of the 30S subunit.

Authors:  Brett Thurlow; Joseph H Davis; Vivian Leong; Trevor F Moraes; James R Williamson; Joaquin Ortega
Journal:  Nucleic Acids Res       Date:  2016-07-05       Impact factor: 16.971
  5 in total

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