Literature DB >> 14657134

Psychrobacter okhotskensis sp. nov., a lipase-producing facultative psychrophile isolated from the coast of the Okhotsk Sea.

Isao Yumoto1, Kikue Hirota, Yoko Sogabe, Yoshinobu Nodasaka, Yuji Yokota, Tamotsu Hoshino.   

Abstract

A facultatively psychrophilic bacterium, strain MD17(T), which hydrolyses lipids at 5 degrees C, was isolated from the Monbetsu coast of the Okhotsk Sea in Hokkaido, Japan, when ice carried by the cold current came to the area. The isolate is an aerobic, non-motile coccobacillus that reduces nitrate to nitrite and hydrolyses Tweens 20, 40, 60 and 80, but not gelatin, DNA or alginic acid. The isolate grows at 0 degrees C, but not at temperatures higher than 36 degrees C; its optimum growth temperature is 25 degrees C. It grows in the presence of 0-10 % NaCl. Its major isoprenoid quinone is ubiquinone-8 (Q-8) and its DNA G+C content is 46.7 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain MD17(T) is closely related to Psychrobacter glacincola DSM 12194(T) (99.0 % similarity) and Psychrobacter immobilis DSM 7229(T) (98.7 % similarity). DNA-DNA hybridization revealed 45.9 % relatedness between strain MD17(T) and P. immobilis ATCC 43116(T) and 33.4 % between strain MD17(T) and P. glacincola ATCC 700754(T). Based on physiological and biochemical characteristics, phylogenetic position (as determined by 16S rRNA gene sequence analysis) and DNA-DNA relatedness, it is concluded that the isolate should be designated as a novel species, for which the name Psychrobacter okhotskensis sp. nov. is proposed. The type strain is MD17(T) (=NCIMB 13931(T)=JCM 11840(T)).

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Year:  2003        PMID: 14657134     DOI: 10.1099/ijs.0.02686-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

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Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

Review 2.  Adaptational properties and applications of cold-active lipases from psychrophilic bacteria.

Authors:  Jonathan Maiangwa; Mohd Shukuri Mohamad Ali; Abu Bakar Salleh; Raja Noor Zaliha Raja Abd Rahman; Fairolniza Mohd Shariff; Thean Chor Leow
Journal:  Extremophiles       Date:  2014-12-04       Impact factor: 2.395

3.  Comparative genomics analysis of five Psychrobacter strains isolated from world-wide habitats reveal high intra-genus variations.

Authors:  Shan Zhang; Weizhi Song; Min Yu; Xuezheng Lin
Journal:  Extremophiles       Date:  2017-03-17       Impact factor: 2.395

4.  Production of alkaline lipase by Corynebacterium paurometabolum, MTCC 6841 isolated from Lake Naukuchiatal, Uttaranchal State, India.

Authors:  Gopal K Joshi; Sarvesh Kumar; Bhumi Nath Tripathi; Vinay Sharma
Journal:  Curr Microbiol       Date:  2006-04-06       Impact factor: 2.188

5.  The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth.

Authors:  Héctor L Ayala-del-Río; Patrick S Chain; Joseph J Grzymski; Monica A Ponder; Natalia Ivanova; Peter W Bergholz; Genevive Di Bartolo; Loren Hauser; Miriam Land; Corien Bakermans; Debora Rodrigues; Joel Klappenbach; Dan Zarka; Frank Larimer; Paul Richardson; Alison Murray; Michael Thomashow; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2010-02-12       Impact factor: 4.792

6.  Biodiversity of poly-extremophilic Bacteria: does combining the extremes of high salt, alkaline pH and elevated temperature approach a physico-chemical boundary for life?

Authors:  Karen J Bowers; Noha M Mesbah; Juergen Wiegel
Journal:  Saline Syst       Date:  2009-11-23

7.  Global ocean resistome revealed: Exploring antibiotic resistance gene abundance and distribution in TARA Oceans samples.

Authors:  Rafael R C Cuadrat; Maria Sorokina; Bruno G Andrade; Tobias Goris; Alberto M R Dávila
Journal:  Gigascience       Date:  2020-05-01       Impact factor: 6.524

8.  High Prevalence of Gammaproteobacteria in the Sediments of Admiralty Bay and North Bransfield Basin, Northwestern Antarctic Peninsula.

Authors:  Diego C Franco; Camila N Signori; Rubens T D Duarte; Cristina R Nakayama; Lúcia S Campos; Vivian H Pellizari
Journal:  Front Microbiol       Date:  2017-02-02       Impact factor: 5.640

Review 9.  Microbial Diversity in Extreme Marine Habitats and Their Biomolecules.

Authors:  Annarita Poli; Ilaria Finore; Ida Romano; Alessia Gioiello; Licia Lama; Barbara Nicolaus
Journal:  Microorganisms       Date:  2017-05-16

10.  A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor.

Authors:  An Li; Ya'nan Chu; Xumin Wang; Lufeng Ren; Jun Yu; Xiaoling Liu; Jianbin Yan; Lei Zhang; Shuangxiu Wu; Shizhong Li
Journal:  Biotechnol Biofuels       Date:  2013-01-15       Impact factor: 6.040

  10 in total

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