Literature DB >> 1465412

1H NMR studies on the catalytic subunit of aspartate transcarbamoylase.

R E Cohen1, M Takama, H K Schachman.   

Abstract

The 1H NMR spectrum of the catalytic subunit of Escherichia coli aspartate transcarbamoylase (EC 2.1.3.2) was simplified by using strains auxotrophic for the aromatic amino acids and a growth medium containing fully deuterated Trp, Phe, and His and partially deuterated Tyr. 1H resonances for Tyr in the catalytic trimer (M(r) = 10(5)) were partially resolved into five peaks at 27 degrees C, which above 50 degrees C were further resolved to give a distinct resonance for each of the eight Tyr residues in the polypeptide chain. Experiments on chemically modified catalytic subunits and on a mutant form in which Tyr-165 was converted to Ser-165 led to the assignment of resonances for Tyr-165, Tyr-240, and Tyr-185. Binding of the substrate, carbamoyl phosphate, caused shifts of two of the unassigned resonances, and the subsequent binding of the aspartate analog succinate perturbed the resonances corresponding to Tyr-165 and Tyr-240. The bisubstrate analog N-(phosphonacetyl)-L-aspartate produced a spectrum differing considerably from that caused by the combination of carbamoyl phosphate and succinate. The NMR spectrum for the Tyr-165-->Ser mutant trimer showed clearly that the single amino acid substitution caused conformational changes affecting the environment of residues remote from the position of the replacement. In contrast, the inactive mutant subunit in which Gly-128 was replaced by Asp exhibited a spectrum virtually identical to that of the wild-type protein. However, addition of the substrate carbamoyl phosphate caused a marked change in the spectrum of the mutant enzyme, whereas that of the wild-type trimer was altered only slightly, showing that the effect of the amino acid substitution was manifested in the NMR spectrum only with the liganded enzyme.

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Year:  1992        PMID: 1465412      PMCID: PMC50661          DOI: 10.1073/pnas.89.24.11881

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

Review 1.  Escherichia coli aspartate transcarbamoylase: the molecular basis for a concerted allosteric transition.

Authors:  E R Kantrowitz; W N Lipscomb
Journal:  Trends Biochem Sci       Date:  1990-02       Impact factor: 13.807

Review 2.  Can a simple model account for the allosteric transition of aspartate transcarbamoylase?

Authors:  H K Schachman
Journal:  J Biol Chem       Date:  1988-12-15       Impact factor: 5.157

3.  Evidence from 13C NMR for protonation of carbamyl-P and N-(phosphonacetyl)-L-aspartate in the active site of aspartate transcarbamylase.

Authors:  M F Roberts; S J Opella; M H Schaffer; H M Phillips; G R Stark
Journal:  J Biol Chem       Date:  1976-10-10       Impact factor: 5.157

4.  Aspartate transcarbamylase. A nuclear magnetic resonance study of the binding of inhibitors and substrates to the catalytic subunit.

Authors:  P G Schmidt; G R Stark; J D Baldeschwieler
Journal:  J Biol Chem       Date:  1969-04-10       Impact factor: 5.157

5.  Structural asymmetry in the CTP-liganded form of aspartate carbamoyltransferase from Escherichia coli.

Authors:  K H Kim; Z X Pan; R B Honzatko; H M Ke; W N Lipscomb
Journal:  J Mol Biol       Date:  1987-08-20       Impact factor: 5.469

6.  Crystallization and preliminary x-ray study of the catalytic subunit of aspartate transcarbamylase.

Authors:  A M Foote; F K Winkler; M F Moody
Journal:  J Mol Biol       Date:  1981-03-05       Impact factor: 5.469

7.  Synthesis of aspartate transcarbamoylase in Escherichia coli: transcriptional regulation of the pyrB-pyrI operon.

Authors:  M Navre; H K Schachman
Journal:  Proc Natl Acad Sci U S A       Date:  1983-03       Impact factor: 11.205

8.  Dynamics of amino acid side chains in membrane proteins by high field solid state deuterium nuclear magnetic resonance spectroscopy. Phenylalanine, tyrosine, and tryptophan.

Authors:  R A Kinsey; A Kintanar; E Oldfield
Journal:  J Biol Chem       Date:  1981-09-10       Impact factor: 5.157

9.  Primary structure and properties of an inactive mutant aspartate transcarbamoylase.

Authors:  K A Wall; H K Schachman
Journal:  J Biol Chem       Date:  1979-12-10       Impact factor: 5.157

10.  Cooperative binding of the bisubstrate analog N-(phosphonacetyl)-L-aspartate to aspartate transcarbamoylase and the heterotropic effects of ATP and CTP.

Authors:  J O Newell; D W Markby; H K Schachman
Journal:  J Biol Chem       Date:  1989-02-15       Impact factor: 5.157

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  2 in total

Review 1.  Solution NMR Spectroscopy for the Study of Enzyme Allostery.

Authors:  George P Lisi; J Patrick Loria
Journal:  Chem Rev       Date:  2016-01-06       Impact factor: 60.622

2.  A solution NMR study showing that active site ligands and nucleotides directly perturb the allosteric equilibrium in aspartate transcarbamoylase.

Authors:  Algirdas Velyvis; Ying R Yang; Howard K Schachman; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-14       Impact factor: 11.205

  2 in total

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