Literature DB >> 14646132

SOLVE and RESOLVE: automated structure solution, density modification and model building.

Thomas Terwilliger1.   

Abstract

The software SOLVE and RESOLVE can carry out all the steps in macromolecular structure solution, from scaling and heavy-atom location through phasing, density modification and model-building in the MAD, SAD and MIR cases. SOLVE uses scoring scheme to convert the decision-making in macromolecular structure solution to an optimization problem. RESOLVE carries out the identification of NCS, density modification and automated model-building. The procedure is fully automated and can function at resolutions as low as 3 A.

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Year:  2003        PMID: 14646132     DOI: 10.1107/s0909049503023938

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  221 in total

1.  Alternaria alternata allergen Alt a 1: a unique β-barrel protein dimer found exclusively in fungi.

Authors:  Maksymilian Chruszcz; Martin D Chapman; Tomasz Osinski; Robert Solberg; Matthew Demas; Przemyslaw J Porebski; Karolina A Majorek; Anna Pomés; Wladek Minor
Journal:  J Allergy Clin Immunol       Date:  2012-06-02       Impact factor: 10.793

2.  Structure of human Na+/H+ exchanger NHE1 regulatory region in complex with calmodulin and Ca2+.

Authors:  Stefan Köster; Tea Pavkov-Keller; Werner Kühlbrandt; Özkan Yildiz
Journal:  J Biol Chem       Date:  2011-09-19       Impact factor: 5.157

3.  Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni.

Authors:  Heping Zheng; Ekaterina V Filippova; Karolina L Tkaczuk; Piotr Dworzynski; Maksymilian Chruszcz; Przemyslaw J Porebski; Zdzislaw Wawrzak; Olena Onopriyenko; Marina Kudritska; Sarah Grimshaw; Alexei Savchenko; Wayne F Anderson; Wladek Minor
Journal:  J Struct Funct Genomics       Date:  2012-03-10

4.  The C-terminal domain of DNA gyrase A adopts a DNA-bending beta-pinwheel fold.

Authors:  Kevin D Corbett; Ryan K Shultzaberger; James M Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

5.  Crystallization and preliminary X-ray crystallographic studies of the PYD domain of human NALP3.

Authors:  Ju Young Bae; Hyun Ho Park
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-10-27

6.  Structure of a short-chain dehydrogenase/reductase from Bacillus anthracis.

Authors:  Jing Hou; Kamila Wojciechowska; Heping Zheng; Maksymilian Chruszcz; David R Cooper; Marcin Cymborowski; Tatiana Skarina; Elena Gordon; Haibin Luo; Alexei Savchenko; Wladek Minor
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-24

7.  Crystal structure of the largest subunit of a bacterial RNA-guided immune complex and its role in DNA target binding.

Authors:  Sabin Mulepati; Amberly Orr; Scott Bailey
Journal:  J Biol Chem       Date:  2012-05-23       Impact factor: 5.157

8.  Crystal structure of Bacillus subtilis SPP1 phage gp23.1, a putative chaperone.

Authors:  David Veesler; Stéphanie Blangy; Julie Lichière; Miguel Ortiz-Lombardía; Paulo Tavares; Valérie Campanacci; Christian Cambillau
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

9.  X-ray crystal structure of the bacterial conjugation factor PsiB, a negative regulator of RecA.

Authors:  Vessela Petrova; Kenneth A Satyshur; Nicholas P George; Darrell McCaslin; Michael M Cox; James L Keck
Journal:  J Biol Chem       Date:  2010-07-21       Impact factor: 5.157

10.  Structure of a myosin•adaptor complex and pairing by cargo.

Authors:  Hang Shi; Nimisha Singh; Filipp Esselborn; Günter Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-12       Impact factor: 11.205

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