Literature DB >> 14645056

Molecular simulation study on the influence of dimethylsulfoxide on the structure of phospholipid bilayers.

Amadeu K Sum1, Juan J de Pablo.   

Abstract

Molecular dynamics simulations of dipalmitoylphosphatidylcholine (DPPC) lipid bilayer/water systems were performed in the presence of dimethylsulfoxide (DMSO) at 2, 5, 10, and 100 mol % DMSO (lipid-free basis). The equilibrium structure and several dynamic properties were determined for these systems. Results show that DMSO penetrates much deeper into the bilayer than water does. It is also found that DMSO molecules do not interact with the polar groups of the lipid headgroup, but exhibit a preference to remain either directly below the headgroup or in the aqueous phase, which is a consequence of the chemical characteristics of DMSO. As the temperature increases, a higher DMSO concentration is observed in the bilayer side of the interface. The area per headgroup in the presence of DMSO is significantly increased from 66.8 A2 for the pure bilayer to as high as 87.0 A2 at 10 mol % DMSO at 350 K. DMSO hydrogen-bonds strongly with water and exhibits unfavorable interactions with the polar headgroups of DPPC, thereby inducing a dehydration of the headgroups.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14645056      PMCID: PMC1303668          DOI: 10.1016/S0006-3495(03)74781-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  19 in total

1.  On the truncation of long-range electrostatic interactions in DNA.

Authors:  J Norberg; L Nilsson
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

Review 2.  A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems.

Authors:  D P Tieleman; S J Marrink; H J Berendsen
Journal:  Biochim Biophys Acta       Date:  1997-11-21

3.  Area per lipid and acyl length distributions in fluid phosphatidylcholines determined by (2)H NMR spectroscopy.

Authors:  H I Petrache; S W Dodd; M F Brown
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

4.  Temperature-dependent perturbation of phospholipid bilayers by dimethylsulfoxide.

Authors:  T J Anchordoguy; J F Carpenter; J H Crowe; L M Crowe
Journal:  Biochim Biophys Acta       Date:  1992-02-17

5.  Molecular dynamics simulation of DPPC bilayer in DMSO.

Authors:  A M Smondyrev; M L Berkowitz
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

6.  The effect of dimethyl sulphoxide on the structure and phase behaviour of palmitoleoylphosphatidylethanolamine.

Authors:  Z W Yu; P J Quinn
Journal:  Biochim Biophys Acta       Date:  2000-12-20

7.  Low concentration of DMSO stabilizes the bilayer gel phase rather than the interdigitated gel phase in dihexadecylphosphatidylcholine membrane.

Authors:  Y Yamashita; K Kinoshita; M Yamazaki
Journal:  Biochim Biophys Acta       Date:  2000-08-25

8.  DMSO produces a new subgel phase in DPPC: DSC and X-ray diffraction study.

Authors:  S Tristram-Nagle; T Moore; H I Petrache; J F Nagle
Journal:  Biochim Biophys Acta       Date:  1998-02-02

9.  Insights into the cryoprotective mechanism of dimethyl sulfoxide for phospholipid bilayers.

Authors:  T J Anchordoguy; C A Cecchini; J H Crowe; L M Crowe
Journal:  Cryobiology       Date:  1991-10       Impact factor: 2.487

10.  Lipid membrane structure and interactions in dimethyl sulfoxide/water mixtures.

Authors:  V I Gordeliy; M A Kiselev; P Lesieur; A V Pole; J Teixeira
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

View more
  14 in total

1.  Effects of cryopreservation on the transcriptome of human embryonic stem cells after thawing and culturing.

Authors:  Vilas Wagh; Kesavan Meganathan; Smita Jagtap; John Antonydas Gaspar; Johannes Winkler; Dimitry Spitkovsky; Jürgen Hescheler; Agapios Sachinidis
Journal:  Stem Cell Rev Rep       Date:  2011-09       Impact factor: 5.739

2.  Interactions of liquid crystal-forming molecules with phospholipid bilayers studied by molecular dynamics simulations.

Authors:  Evelina B Kim; Nathan Lockwood; Manan Chopra; Orlando Guzmán; Nicholas L Abbott; Juan J de Pablo
Journal:  Biophys J       Date:  2005-08-19       Impact factor: 4.033

3.  Effects of Dimethyl Sulfoxide on Surface Water near Phospholipid Bilayers.

Authors:  Yuno Lee; Philip A Pincus; Changbong Hyeon
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

Review 4.  Cryoprotectant Toxicity: Facts, Issues, and Questions.

Authors:  Benjamin P Best
Journal:  Rejuvenation Res       Date:  2015-09-22       Impact factor: 4.663

5.  Cryoprotection synergism between glycerol and dimethyl sulfoxide improves the mitochondrial transmembrane potential, plasmalemma, acrosomal and DNA integrities, and in vivo fertility of water buffalo (Bubalus bubalis) spermatozoa.

Authors:  Syed Aftab Hussain Shah; Syed Murtaza Hassan Andrabi; Hussain Ahmed; Irfan Zia Qureshi
Journal:  Cytotechnology       Date:  2016-10-19       Impact factor: 2.058

6.  Molecular simulation study of structural and dynamic properties of mixed DPPC/DPPE bilayers.

Authors:  Sukit Leekumjorn; Amadeu K Sum
Journal:  Biophys J       Date:  2006-03-13       Impact factor: 4.033

Review 7.  Acyl chain order parameter profiles in phospholipid bilayers: computation from molecular dynamics simulations and comparison with 2H NMR experiments.

Authors:  Louic S Vermeer; Bert L de Groot; Valérie Réat; Alain Milon; Jerzy Czaplicki
Journal:  Eur Biophys J       Date:  2007-06-28       Impact factor: 1.733

8.  A molecular dynamics study of DMPC lipid bilayers interacting with dimethylsulfoxide-water mixtures.

Authors:  D Pinisetty; R Alapati; R V Devireddy
Journal:  J Membr Biol       Date:  2012-07-27       Impact factor: 1.843

9.  The permeability enhancing mechanism of DMSO in ceramide bilayers simulated by molecular dynamics.

Authors:  Rebecca Notman; Wouter K den Otter; Massimo G Noro; W J Briels; Jamshed Anwar
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

10.  Molecular mechanism of the synergistic effects of vitrification solutions on the stability of phospholipid bilayers.

Authors:  Zak E Hughes; Ricardo L Mancera
Journal:  Biophys J       Date:  2014-06-17       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.