Literature DB >> 14643206

On the three-dimensional reconstruction of icosahedral particles.

Jorge Navaza1.   

Abstract

The problem of reconstructing an isolated particle from its projections, using spherical harmonics to represent the scattering density, is reformulated. A technique that makes explicit and efficient use of the symmetry to describe the angular part of the scattering density is developed in full detail for the particular case of icosahedral symmetry. It provides a very concise method, where the effort is concentrated in the determination of the radial part of the Fourier transform of the particle scattering density. The method allows individual-image model-independent view determination. An illustrative numerical example is given.

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Year:  2003        PMID: 14643206     DOI: 10.1016/j.jsb.2003.09.007

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  12 in total

Review 1.  3D electron microscopy of biological nanomachines: principles and applications.

Authors:  C O S Sorzano; S Jonic; M Cottevieille; E Larquet; N Boisset; S Marco
Journal:  Eur Biophys J       Date:  2007-07-05       Impact factor: 1.733

2.  Geometric mismatches within the concentric layers of rotavirus particles: a potential regulatory switch of viral particle transcription activity.

Authors:  Sonia Libersou; Xavier Siebert; Malika Ouldali; Leandro F Estrozi; Jorge Navaza; Annie Charpilienne; Pascale Garnier; Didier Poncet; Jean Lepault
Journal:  J Virol       Date:  2008-01-09       Impact factor: 5.103

3.  Sequestration of free tubulin molecules by the viral protein NSP2 induces microtubule depolymerization during rotavirus infection.

Authors:  Davy Martin; Mariela Duarte; Jean Lepault; Didier Poncet
Journal:  J Virol       Date:  2009-12-23       Impact factor: 5.103

4.  Reconstruction from limited single-particle diffraction data via simultaneous determination of state, orientation, intensity, and phase.

Authors:  Jeffrey J Donatelli; James A Sethian; Peter H Zwart
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-26       Impact factor: 11.205

5.  Structural peptides of a nonenveloped virus are involved in assembly and membrane translocation.

Authors:  Christophe Chevalier; Marie Galloux; Joan Pous; Céline Henry; Jérôme Denis; Bruno Da Costa; Jorge Navaza; Jean Lepault; Bernard Delmas
Journal:  J Virol       Date:  2005-10       Impact factor: 5.103

6.  An introduction to maximum-likelihood methods in cryo-EM.

Authors:  Fred J Sigworth; Peter C Doerschuk; Jose-Maria Carazo; Sjors H W Scheres
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

Review 7.  Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy.

Authors:  Nikolaus Grigorieff; Stephen C Harrison
Journal:  Curr Opin Struct Biol       Date:  2011-02-18       Impact factor: 6.809

8.  Application of symmetry adapted function method for three-dimensional reconstruction of octahedral biological macromolecules.

Authors:  Songjun Zeng; Hongrong Liu; Qibin Yang
Journal:  Int J Biomed Imaging       Date:  2010-01-21

9.  Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles.

Authors:  Leandro F Estrozi; Ethan C Settembre; Gaël Goret; Brian McClain; Xing Zhang; James Z Chen; Nikolaus Grigorieff; Stephen C Harrison
Journal:  J Mol Biol       Date:  2012-10-23       Impact factor: 5.469

10.  Combining X-ray and electron-microscopy data to solve crystal structures.

Authors:  Jorge Navaza
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
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