Literature DB >> 14634833

Five highly informative X-chromosomal STRs in Koreans.

Kyoung-Jin Shin1, Byung-Ki Kwon, Sang-Seob Lee, Ji-Eun Yoo, Myung Jin Park, Ukhee Chung, Hwan Young Lee, Gil-Ro Han, Jong-Hoon Choi, Chong-Youl Kim.   

Abstract

The five X-chromosomal short tandem repeats (STRs) GATA172D05, HPRTB, DXS8377, DXS101 and HumARA were analyzed in 150 males and 150 females from Korea. Markers were amplified in a quadruplex and a monoplex PCR reaction with fluorescently labeled primers. For accurate and reproducible STR typing, sequenced allelic ladders were constructed and a Genotyper macro was programmed. Some differences were found on comparing the allele frequencies of Koreans with those of other populations in DXS8377, DXS101 and HumARA. The forensic efficiency parameters showed that the five X-linked STRs are highly informative for forensic application in Koreans.

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Year:  2003        PMID: 14634833     DOI: 10.1007/s00414-003-0415-2

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  25 in total

1.  Population data on the X chromosome short tandem repeat locus HumHPRTB in two regions of Germany.

Authors:  R Szibor; S Lautsch; I Plate; N Beck
Journal:  J Forensic Sci       Date:  2000-01       Impact factor: 1.832

2.  DXS101: a highly polymorphic X-linked STR.

Authors:  J Edelmann; R Szibor
Journal:  Int J Legal Med       Date:  2001       Impact factor: 2.686

3.  Mutation of the repeat number of the HPRTB locus and structure of rare intermediate alleles.

Authors:  G Mertens; M Gielis; N Mommers; A Mularoni; J Lamartine; H Heylen; L Muylle; A Vandenberghe
Journal:  Int J Legal Med       Date:  1999       Impact factor: 2.686

4.  Population data on X chromosome short tandem repeat loci HPRTB and AR in Taiwan.

Authors:  Meng-Yi Chen; Fang-Chin Wu; Lin-Meng Meng; Shiu-Ming Cheng; Chi-Hsiang Chao; Chang-En Pu
Journal:  Forensic Sci Int       Date:  2002-04-18       Impact factor: 2.395

5.  Sequence variation and allele nomenclature for the X-linked STRs DXS9895, DXS8378, DXS7132, DXS6800, DXS7133, GATA172D05, DXS7423 and DXS8377.

Authors:  Jeanett Edelmann; Danilo Deichsel; Sandra Hering; Ines Plate; Reinhard Szibor
Journal:  Forensic Sci Int       Date:  2002-09-26       Impact factor: 2.395

6.  Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups.

Authors:  A Edwards; H A Hammond; L Jin; C T Caskey; R Chakraborty
Journal:  Genomics       Date:  1992-02       Impact factor: 5.736

7.  Tetranucleotide repeat polymorphism at the HPRT locus.

Authors:  C M Hearne; J A Todd
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

8.  Japanese population data on X-chromosomal STR locus AR.

Authors:  T Kishida; Y Tamaki
Journal:  Nihon Hoigaku Zasshi       Date:  1997-10

9.  Variation in short tandem repeat sequences--a survey of twelve microsatellite loci for use as forensic identification markers.

Authors:  A Urquhart; C P Kimpton; T J Downes; P Gill
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

Review 10.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

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  10 in total

1.  Genetic characteristics and population study of 4 X-chromosomal STRs in Koreans: evidence for a null allele at DXS9898.

Authors:  Hwan Young Lee; Myung Jin Park; Chan Kwon Jeong; Seon Yeong Lee; Ji-Eun Yoo; Ukhee Chung; Jong-Hoon Choi; Chong-Youl Kim; Kyoung-Jin Shin
Journal:  Int J Legal Med       Date:  2004-06-08       Impact factor: 2.686

2.  Multistep microsatellite mutation in the maternally transmitted locus D13S317: a case of maternal allele mismatch in the child.

Authors:  Devinder Singh Negi; Mahfooz Alam; S Annapurna Bhavani; Javaregowda Nagaraju
Journal:  Int J Legal Med       Date:  2006-03-03       Impact factor: 2.686

3.  A GEP-ISFG collaborative study on the optimization of an X-STR decaplex: data on 15 Iberian and Latin American populations.

Authors:  Leonor Gusmão; Paula Sánchez-Diz; Cíntia Alves; Iva Gomes; María Teresa Zarrabeitia; Mariel Abovich; Ivannia Atmetlla; Cecilia Bobillo; Luisa Bravo; Juan Builes; Laura Cainé; Raquel Calvo; Elizeu Carvalho; Mónica Carvalho; Regina Cicarelli; Laura Catelli; Daniel Corach; Marta Espinoza; Oscar García; Marcelo Malaghini; Joyce Martins; Fátima Pinheiro; Maria João Porto; Eduardo Raimondi; Jose Antonio Riancho; Amelia Rodríguez; Anayanci Rodríguez; Belén Rodríguez Cardozo; Vicente Schneider; Sandra Silva; Celso Tavares; Ulises Toscanini; Carlos Vullo; Martin Whittle; Iñaki Yurrebaso; Angel Carracedo; António Amorim
Journal:  Int J Legal Med       Date:  2008-12-12       Impact factor: 2.686

4.  Allele frequency distribution of 13 X-chromosomal STR loci in Pakistani population.

Authors:  Muhammad Akram Tariq; Obaid Ullah; S Amer Riazuddin; Sheikh Riazuddin
Journal:  Int J Legal Med       Date:  2008-07-16       Impact factor: 2.686

5.  Haplotype analysis of two X-chromosome STR clusters in the Pakistani population.

Authors:  Muhammad Akram Tariq; Muhammad Farooq Sabir; S Amer Riazuddin; Sheikh Riazuddin
Journal:  Int J Legal Med       Date:  2008-11-15       Impact factor: 2.686

6.  Mutation rates of 15 X chromosomal short tandem repeat markers.

Authors:  Toni M Diegoli; Adrian Linacre; Moses S Schanfield; Michael D Coble
Journal:  Int J Legal Med       Date:  2014-05-09       Impact factor: 2.686

7.  Sixteen X-chromosomal STRs in two octaplex PCRs in Japanese population and development of 15-locus multiplex PCR system.

Authors:  Yasutaka Nakamura; Kiyoshi Minaguchi
Journal:  Int J Legal Med       Date:  2010-05-29       Impact factor: 2.686

8.  Hungarian population data of four X-linked markers: DXS8378, DXS7132, HPRTB, and DXS7423.

Authors:  Andrea Zalán; Antónia Völgyi; Martin Jung; Orsolya Peterman; Horolma Pamjav
Journal:  Int J Legal Med       Date:  2005-10-20       Impact factor: 2.686

9.  The HumARA genotype is linked to spinal and bulbar muscular dystrophy and some further disease risks and should no longer be used as a DNA marker for forensic purposes.

Authors:  Reinhard Szibor; Sandra Hering; Jeanett Edelmann
Journal:  Int J Legal Med       Date:  2005-02-03       Impact factor: 2.686

10.  Genetic polymorphism and haplotype analysis of 4 tightly linked X-STR duos in Koreans.

Authors:  Eun Jin Lim; Hwan Young Lee; Jeong Eun Sim; Woo Ick Yang; Kyoung-Jin Shin
Journal:  Croat Med J       Date:  2009-06       Impact factor: 1.351

  10 in total

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