Literature DB >> 14632258

The Sleeping Beauty transposable element: evolution, regulation and genetic applications.

Zoltán Ivics1, Christopher D Kaufman, Hatem Zayed, Csaba Miskey, Oliver Walisko, Zsuzsanna Izsvák.   

Abstract

Members of the Tc1/mariner superfamily of transposable elements isolated from vertebrate species are inactive due to the accumulation of mutations. A representative of a subfamily of fish elements estimated to be last active > 10 million years ago has been reconstructed, and named Sleeping Beauty(SB). This element opened up new avenues for studies on DNA transposition in vertebrates, and for the development of transposon tools for genetic manipulation in important model species and in humans. Multiple transposase binding sites within the terminal inverted repeats, a transpositional enhancer sequence, unequal affinity of the transposase to the binding sites and the activity of the cellular HMGB1 protein all contribute to a highly regulated assembly of SB synaptic complexes, which is likely a requirement for the subsequent catalytic steps. Host proteins involved in double-strand DNA break repair are limiting factors of SB transposition in mammalian cells, underscoring evolutionary, structural and functional links between DNA transposition, retroviral integration and V(D)J recombination. SB catalyzes efficient cut-and-paste transposition in a wide range of vertebrate cells in tissue culture, and in somatic tissues as well as the germline of the mouse and zebrafish in vivo, indicating its usefulness as a vector for transgenesis and insertional mutagenesis.

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Year:  2004        PMID: 14632258

Source DB:  PubMed          Journal:  Curr Issues Mol Biol        ISSN: 1467-3037            Impact factor:   2.081


  27 in total

1.  Structural analysis of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA.

Authors:  Stephan Watkins; Gertie van Pouderoyen; Titia K Sixma
Journal:  Nucleic Acids Res       Date:  2004-08-10       Impact factor: 16.971

2.  High-resolution genome-wide mapping of transposon integration in mammals.

Authors:  Stephen R Yant; Xiaolin Wu; Yong Huang; Brian Garrison; Shawn M Burgess; Mark A Kay
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

3.  Targeted genetic modification of cell lines for recombinant protein production.

Authors:  Niall Barron; Olga Piskareva; Mohan Muniyappa
Journal:  Cytotechnology       Date:  2007-02-28       Impact factor: 2.058

Review 4.  Investigating the genetics of visual processing, function and behaviour in zebrafish.

Authors:  Sabine L Renninger; Helia B Schonthaler; Stephan C F Neuhauss; Ralf Dahm
Journal:  Neurogenetics       Date:  2011-01-26       Impact factor: 2.660

5.  Genomic landscape of human, bat, and ex vivo DNA transposon integrations.

Authors:  Rebeca Campos-Sánchez; Aurélie Kapusta; Cédric Feschotte; Francesca Chiaromonte; Kateryna D Makova
Journal:  Mol Biol Evol       Date:  2014-04-22       Impact factor: 16.240

6.  Biochemical characterization of a SET and transposase fusion protein, Metnase: its DNA binding and DNA cleavage activity.

Authors:  Yaritzabel Roman; Masahiko Oshige; Young-Ju Lee; Kristie Goodwin; Millie M Georgiadis; Robert A Hromas; Suk-Hee Lee
Journal:  Biochemistry       Date:  2007-09-18       Impact factor: 3.162

7.  Transgenesis in Xenopus using the Sleeping Beauty transposon system.

Authors:  Donald A Yergeau; Michelle R Johnson Hamlet; Emin Kuliyev; Haiqing Zhu; Joanne R Doherty; Taylor D Archer; Andrea P Subhawong; Marc B Valentine; Clair M Kelley; Paul E Mead
Journal:  Dev Dyn       Date:  2009-07       Impact factor: 3.780

Review 8.  Mouse models of cancer: Sleeping Beauty transposons for insertional mutagenesis screens and reverse genetic studies.

Authors:  Barbara R Tschida; David A Largaespada; Vincent W Keng
Journal:  Semin Cell Dev Biol       Date:  2014-01-24       Impact factor: 7.727

9.  ModuleOrganizer: detecting modules in families of transposable elements.

Authors:  Sebastien Tempel; Christine Rousseau; Fariza Tahi; Jacques Nicolas
Journal:  BMC Bioinformatics       Date:  2010-09-22       Impact factor: 3.169

10.  Development of a database system for mapping insertional mutations onto the mouse genome with large-scale experimental data.

Authors:  Wenwei Yang; Ke Jin; Xing Xie; Dongsheng Li; Jigang Yang; Li Wang; Ning Gu; Yang Zhong; Ling V Sun
Journal:  BMC Genomics       Date:  2009-12-03       Impact factor: 3.969

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