Literature DB >> 14625345

The use of deuterium isotope effects to probe the active site properties, mechanism of cytochrome P450-catalyzed reactions, and mechanisms of metabolically dependent toxicity.

Sidney D Nelson1, William F Trager.   

Abstract

Critical elements from studies that have led to our current understanding of the factors that cause the observed primary deuterium isotope effect, (kH/kD)obs, of most enzymatically mediated reactions to be much smaller than the "true" or intrinsic primary deuterium isotope effect, kH/kD, for the reaction are presented. This new understanding has provided a unique and powerful tool for probing the catalytic and active site properties of enzymes, particularly the cytochromes P450 (P450). Examples are presented that illustrate how the technique has been used to determine kH/kD, and properties such as the catalytic nature of the reactive oxenoid intermediate, prochiral selectivity, the chemical and enzymatic mechanisms of cytochrome P450-catalyzed reactions, and the relative active site size of different P450 isoforms. Examples are also presented of how deuterium isotope effects have been used to probe mechanisms of the formation of reactive metabolites that can cause toxic effects.

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Year:  2003        PMID: 14625345     DOI: 10.1124/dmd.31.12.1481

Source DB:  PubMed          Journal:  Drug Metab Dispos        ISSN: 0090-9556            Impact factor:   3.922


  29 in total

1.  Selective hydroxylation of alkanes by an extracellular fungal peroxygenase.

Authors:  Sebastian Peter; Matthias Kinne; Xiaoshi Wang; René Ullrich; Gernot Kayser; John T Groves; Martin Hofrichter
Journal:  FEBS J       Date:  2011-09-08       Impact factor: 5.542

2.  Intrinsic isotope effects on benzylic hydroxylation by the aromatic amino acid hydroxylases: evidence for hydrogen tunneling, coupled motion, and similar reactivities.

Authors:  Jorge Alex Pavon; Paul F Fitzpatrick
Journal:  J Am Chem Soc       Date:  2005-11-30       Impact factor: 15.419

3.  Minor activities and transition state properties of the human steroid hydroxylases cytochromes P450c17 and P450c21, from reactions observed with deuterium-labeled substrates.

Authors:  Francis K Yoshimoto; Yishan Zhou; Hwei-Ming Peng; David Stidd; Jennifer A Yoshimoto; Kamalesh K Sharma; Susan Matthew; Richard J Auchus
Journal:  Biochemistry       Date:  2012-08-27       Impact factor: 3.162

4.  A Phase I dose-escalation, pharmacokinetics and food-effect study of oral donafenib in patients with advanced solid tumours.

Authors:  Xiaoyu Li; Meng Qiu; Li Zheng; ShengJun Wang; Hong Zhu; Bi Feng
Journal:  Cancer Chemother Pharmacol       Date:  2020-02-01       Impact factor: 3.333

5.  Kinetic Deuterium Isotope Effects in Cytochrome P450 Reactions.

Authors:  Frederick P Guengerich
Journal:  Methods Enzymol       Date:  2017-07-18       Impact factor: 1.600

6.  Synthesis of deuterium-enriched and fluorine-substituted plinabulin derivatives and evaluation of their antitumor activities.

Authors:  Zhongpeng Ding; Yingwei Hou; Shixiao Wang; Tianwen Sun; Mingxu Ma; Huashi Guan; Wenbao Li
Journal:  Mol Divers       Date:  2017-05-09       Impact factor: 2.943

7.  Nickel-Catalyzed Reduction of Secondary and Tertiary Amides.

Authors:  Bryan J Simmons; Marie Hoffmann; Jaeyeon Hwang; Moritz K Jackl; Neil K Garg
Journal:  Org Lett       Date:  2017-03-24       Impact factor: 6.005

Review 8.  Oxygen Activation and Radical Transformations in Heme Proteins and Metalloporphyrins.

Authors:  Xiongyi Huang; John T Groves
Journal:  Chem Rev       Date:  2017-12-29       Impact factor: 60.622

9.  Discovery of (R)-(2-fluoro-4-((-4-methoxyphenyl)ethynyl)phenyl) (3-hydroxypiperidin-1-yl)methanone (ML337), an mGlu3 selective and CNS penetrant negative allosteric modulator (NAM).

Authors:  Cody J Wenthur; Ryan Morrison; Andrew S Felts; Katrina A Smith; Julie L Engers; Frank W Byers; J Scott Daniels; Kyle A Emmitte; P Jeffrey Conn; Craig W Lindsley
Journal:  J Med Chem       Date:  2013-06-13       Impact factor: 7.446

10.  Oxidative cleavage of diverse ethers by an extracellular fungal peroxygenase.

Authors:  Matthias Kinne; Marzena Poraj-Kobielska; Sally A Ralph; René Ullrich; Martin Hofrichter; Kenneth E Hammel
Journal:  J Biol Chem       Date:  2009-08-27       Impact factor: 5.157

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