Literature DB >> 14614618

Microbial community utilization of recalcitrant and simple carbon compounds: impact of oak-woodland plant communities.

Mark P Waldrop1, Mary K Firestone.   

Abstract

Little is known about how the structure of microbial communities impacts carbon cycling or how soil microbial community composition mediates plant effects on C-decomposition processes. We examined the degradation of four (13)C-labeled compounds (starch, xylose, vanillin, and pine litter), quantified rates of associated enzyme activities, and identified microbial groups utilizing the (13)C-labeled substrates in soils under oaks and in adjacent open grasslands. By quantifying increases in non-(13)C-labeled carbon in microbial biomarkers, we were also able to identify functional groups responsible for the metabolism of indigenous soil organic matter. Although microbial community composition differed between oak and grassland soils, the microbial groups responsible for starch, xylose, and vanillin degradation, as defined by (13)C-PLFA, did not differ significantly between oak and grassland soils. Microbial groups responsible for pine litter and SOM-C degradation did differ between the two soils. Enhanced degradation of SOM resulting from substrate addition (priming) was greater in grassland soils, particularly in response to pine litter addition; under these conditions, fungal and Gram+ biomarkers showed more incorporation of SOM-C than did Gram- biomarkers. In contrast, the oak soil microbial community primarily incorporated C from the added substrates. More (13)C (from both simple and recalcitrant sources) was incorporated into the Gram- biomarkers than Gram+ biomarkers despite the fact that the Gram+ group generally comprised a greater portion of the bacterial biomass than did markers for the Gram- group. These experiments begin to identify components of the soil microbial community responsible for decomposition of different types of C-substrates. The results demonstrate that the presence of distinctly different plant communities did not alter the microbial community profile responsible for decomposition of relatively labile C-substrates but did alter the profiles of microbial communities responsible for decomposition of the more recalcitrant substrates, pine litter and indigenous soil organic matter.

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Year:  2003        PMID: 14614618     DOI: 10.1007/s00442-003-1419-9

Source DB:  PubMed          Journal:  Oecologia        ISSN: 0029-8549            Impact factor:   3.225


  5 in total

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2.  Rhizosphere feedbacks in elevated CO(2).

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3.  Impact of carbon and flooding on the metabolic diversity of microbial communities in soils.

Authors:  D A Bossio; K M Scow
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4.  Microbial community composition and function beneath temperate trees exposed to elevated atmospheric carbon dioxide and ozone.

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Journal:  Oecologia       Date:  2002-04-01       Impact factor: 3.225

5.  Ratios of carbon isotopes in microbial lipids as an indicator of substrate usage.

Authors:  W R Abraham; C Hesse; O Pelz
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

  5 in total
  33 in total

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2.  Differential utilization of carbon substrates by bacteria and fungi in tundra soil.

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Journal:  Appl Environ Microbiol       Date:  2009-04-10       Impact factor: 4.792

3.  Relationships among plants, soils and microbial communities along a hydrological gradient in the New Jersey Pinelands, USA.

Authors:  Shen Yu; Joan G Ehrenfeld
Journal:  Ann Bot       Date:  2010-01       Impact factor: 4.357

4.  The importance of anabolism in microbial control over soil carbon storage.

Authors:  Chao Liang; Joshua P Schimel; Julie D Jastrow
Journal:  Nat Microbiol       Date:  2017-07-25       Impact factor: 17.745

5.  Effects of poultry manure on soil biochemical properties in phthalic acid esters contaminated soil.

Authors:  Jun Gao; Xiaojian Qin; Xuqin Ren; Haifeng Zhou
Journal:  Environ Sci Pollut Res Int       Date:  2015-08-23       Impact factor: 4.223

6.  Microbial Enzymatic Activities and Community-Level Physiological Profiles (CLPP) in Subsoil Layers Are Altered by Harvest Residue Management Practices in a Tropical Eucalyptus grandis Plantation.

Authors:  François Maillard; Valentin Leduc; Cyrille Bach; José Leonardo de Moraes Gonçalves; Fernando Dini Androte; Laurent Saint-André; Jean-Paul Laclau; Marc Buée; Agnès Robin
Journal:  Microb Ecol       Date:  2018-11-29       Impact factor: 4.552

7.  Seafloor ecosystem functioning: the importance of organic matter priming.

Authors:  Paul van Nugteren; Leon Moodley; Geert-Jan Brummer; Carlo H R Heip; Peter M J Herman; Jack J Middelburg
Journal:  Mar Biol       Date:  2009-07-18       Impact factor: 2.573

8.  Seasonal dynamics of microbial community composition and function in oak canopy and open grassland soils.

Authors:  M P Waldrop; M K Firestone
Journal:  Microb Ecol       Date:  2006-08-15       Impact factor: 4.552

9.  The priming effect of soluble carbon inputs in organic and mineral soils from a temperate forest.

Authors:  Hui Wang; Wenhua Xu; Guoqing Hu; Weiwei Dai; Ping Jiang; Edith Bai
Journal:  Oecologia       Date:  2015-03-20       Impact factor: 3.225

Review 10.  Environmental risk assessments for transgenic crops producing output trait enzymes.

Authors:  Alan Raybould; Ann Tuttle; Scott Shore; Terry Stone
Journal:  Transgenic Res       Date:  2009-11-19       Impact factor: 2.788

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