Literature DB >> 14612565

Redesigning the monovalent cation specificity of an enzyme.

Swati Prasad1, Kelly J Wright, Dolly Banerjee Roy, Leslie A Bush, Angelene M Cantwell, Enrico Di Cera.   

Abstract

Monovalent-cation-activated enzymes are abundantly represented in plants and in the animal world. Most of these enzymes are specifically activated by K+, whereas a few of them show preferential activation by Na+. The monovalent cation specificity of these enzymes remains elusive in molecular terms and has not been reengineered by site-directed mutagenesis. Here we demonstrate that thrombin, a Na+-activated allosteric enzyme involved in vertebrate blood clotting, can be converted into a K+-specific enzyme by redesigning a loop that shapes the entrance to the cation-binding site. The conversion, however, does not result into a K+-activated enzyme.

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Year:  2003        PMID: 14612565      PMCID: PMC283499          DOI: 10.1073/pnas.2333109100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  51 in total

1.  Monovalent cation-induced conformational change in glucose oxidase leading to stabilization of the enzyme.

Authors:  A Ahmad; M S Akhtar; V Bhakuni
Journal:  Biochemistry       Date:  2001-02-20       Impact factor: 3.162

2.  M2 pore mutations convert the glycine receptor channel from being anion- to cation-selective.

Authors:  A Keramidas; A J Moorhouse; C R French; P R Schofield; P H Barry
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

3.  Structure of Haemophilus influenzae HslV protein at 1.9 A resolution, revealing a cation-binding site near the catalytic site.

Authors:  M C Sousa; D B McKay
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-11-21

4.  See potassium run.

Authors:  C Miller
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

5.  Conversion of the ion selectivity of the 5-HT(3a) receptor from cationic to anionic reveals a conserved feature of the ligand-gated ion channel superfamily.

Authors:  M J Gunthorpe; S C Lummis
Journal:  J Biol Chem       Date:  2001-01-03       Impact factor: 5.157

6.  Activation of ribokinase by monovalent cations.

Authors:  C Evalena Andersson; Sherry L Mowbray
Journal:  J Mol Biol       Date:  2002-01-18       Impact factor: 5.469

7.  Cloning, sequence analysis, and expression in Escherichia coli of the gene encoding monovalent cation-activated levodione reductase from Corynebacterium aquaticum M-13.

Authors:  A Yoshisumi; M Wada; H Takagi; S Shimizu; S Nakamori
Journal:  Biosci Biotechnol Biochem       Date:  2001-04       Impact factor: 2.043

8.  Cation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica.

Authors:  R Radfar; A Leaphart; J M Brewer; W Minor; J D Odom; R B Dunlap; C R Lovell; L Lebioda
Journal:  Biochemistry       Date:  2000-11-28       Impact factor: 3.162

9.  Replacement of thrombin residue G184 with Lys or Arg fails to mimic Na+ binding.

Authors:  D B Roy; T Rose; E Di Cera
Journal:  Proteins       Date:  2001-05-15

10.  Effects of monovalent cations on cytochrome P-450 camphor. Evidence for preferential binding of potassium.

Authors:  E Deprez; C Di Primo; G H Hoa; P Douzou
Journal:  FEBS Lett       Date:  1994-06-27       Impact factor: 4.124

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  18 in total

1.  Conformational selection or induced fit? A critical appraisal of the kinetic mechanism.

Authors:  Austin D Vogt; Enrico Di Cera
Journal:  Biochemistry       Date:  2012-07-16       Impact factor: 3.162

2.  Effect of Na+ binding on the conformation, stability and molecular recognition properties of thrombin.

Authors:  Vincenzo De Filippis; Elisa De Dea; Filippo Lucatello; Roberta Frasson
Journal:  Biochem J       Date:  2005-09-01       Impact factor: 3.857

3.  Mechanism of Na(+) binding to thrombin resolved by ultra-rapid kinetics.

Authors:  Stefano Gianni; Ylva Ivarsson; Alaji Bah; Leslie A Bush-Pelc; Enrico Di Cera
Journal:  Biophys Chem       Date:  2007-09-29       Impact factor: 2.352

4.  Stabilization of the E* form turns thrombin into an anticoagulant.

Authors:  Alaji Bah; Christopher J Carrell; Zhiwei Chen; Prafull S Gandhi; Enrico Di Cera
Journal:  J Biol Chem       Date:  2009-05-27       Impact factor: 5.157

5.  Mutant N143P reveals how Na+ activates thrombin.

Authors:  Weiling Niu; Zhiwei Chen; Leslie A Bush-Pelc; Alaji Bah; Prafull S Gandhi; Enrico Di Cera
Journal:  J Biol Chem       Date:  2009-10-21       Impact factor: 5.157

6.  Switching cation-binding loops paves the way for redesigning allosteric activation.

Authors:  Muriel C Maurer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-17       Impact factor: 11.205

7.  Redesigning allosteric activation in an enzyme.

Authors:  Sadhna Rana; Nicola Pozzi; Leslie A Pelc; Enrico Di Cera
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-22       Impact factor: 11.205

Review 8.  Molecular Mechanisms of Enzyme Activation by Monovalent Cations.

Authors:  David W Gohara; Enrico Di Cera
Journal:  J Biol Chem       Date:  2016-07-26       Impact factor: 5.157

9.  Na+ binding to meizothrombin desF1.

Authors:  M E Papaconstantinou; P S Gandhi; Z Chen; A Bah; E Di Cera
Journal:  Cell Mol Life Sci       Date:  2008-11       Impact factor: 9.261

10.  Control of ion selectivity in LeuT: two Na+ binding sites with two different mechanisms.

Authors:  Sergei Y Noskov; Benoît Roux
Journal:  J Mol Biol       Date:  2008-01-15       Impact factor: 5.469

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