| Literature DB >> 14609468 |
Carol A Lichtensteiger1, Kathleen Heinz-Taheny, Tanasa S Osborne, Robert J Novak, Beth A Lewis, Margaret L Firth.
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Year: 2003 PMID: 14609468 PMCID: PMC3033081 DOI: 10.3201/eid0910.020617
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Sequence (5´ to 3´) of primers and probes used in real-time reverse transcriptase–polymerase chain reaction to assay for West Nile virus genome in canid tissue
| Item | West Nile virus | St. Louis encephalitis virus |
|---|---|---|
| Forward primer | CAGACCACGCTACGGCG | GAAAACTGGGTTCTGCGCA |
| Reverse primer | CTAGGGCCGCGTGGG | GTTGCTGCCTAGCATCCATCC |
| Probe | TCTGCGGAGAGTGCAGTCTGCGAT | TGGATATGCCCTAGTTGCGCTGGC |
Figure 1Encephalitis and myocarditis in two West Nile virus–infected canids. A, histopathology of the cerebrum of the wolf. Focus of lymphocyte infiltration and necrosis with mild gliosis; arrow indicates necrotic neuron. Hematoxylin-eosin staining. B, histopathology of the heart of the dog. Focus of leukocytic infiltration, mostly lymphocytes, and myocardial cell degeneration and necrosis. Hematoxylin-eosin staining. C, West Nile virus immunohistochemistry of the cerebrum of the wolf. Intense labeling of neurons in focus of inflammation. Some labeling is also in the glial cells or lymphocytes. Immunoperoxidase with hematoxylin counterstain. D, West Nile virus immunohistochemistry of the heart of dog. Intense labeling of most myocardial cells in the field. Immunoimmunoperoxidase with hematoxylin counterstain.
Figure 2Real-time reverse transcriptase polymerase chain reaction of RNA extracted from the wolf brain. The amplification was duplexed with primers and probes for West Nile and St. Louis encephalitis viruses detected with fluorochrome dyes, FAM and VIC, respectively. Test and control samples were run in parallel and in duplicate (extraction and amplification) with consistent results. Delta reaction on the y axis represents the change in threshold fluorescence. The box lists the source of the template nucleic acid and the specificity of the fluorochrome probe (template source-probe specificity). WNV, West Nile virus; NY99, an isolate from the 1999 outbreak in New York; SLEV, St. Louis encephalitis virus; NTC, no template control.