Literature DB >> 14609327

Changes of low-frequency vibrational modes induced by universal 15N- and 13C-isotope labeling in S2/S1 FTIR difference spectrum of oxygen-evolving complex.

Yukihiro Kimura1, Naoki Mizusawa, Asako Ishii, Toshihiro Yamanari, Taka-aki Ono.   

Abstract

The effects of universal (15)N- and (13)C-isotope labeling on the low- (650-350 cm(-1)) and mid-frequency (1800-1200 cm(-1)) S(2)/S(1) Fourier transform infrared (FTIR) difference spectrum of the photosynthetic oxygen-evolving complex (OEC) were investigated in histidine-tagged photosystem (PS) II core particles from Synechocystis sp. PCC 6803. In the mid-frequency region, the amide II modes were predominantly affected by (15)N-labeling, whereas, in addition to the amide II, the amide I and carboxylate modes were markedly affected by (13)C-labeling. In the low-frequency region, by comparing a light-induced spectrum in the presence of ferricyanide as the electron acceptor, with the double difference S(2)/S(1) spectrum obtained by subtracting the Q(A)(-)/Q(A) from the S(2)Q(A)(-)/S(1)Q(A) spectrum, considerable numbers of bands found in the light-induced spectrum were assigned to the S(2)/S(1) vibrational modes in the unlabeled PS II core particles. Upon (13)C-labeling, changes were observed for most of the prominent bands in the S(2)/S(1) spectrum. Although (15)N-labeling also induced changes similar to those by (13)C-labeling, the bands at 616(-), 605(+), 561(+), 555(-), and 544(-) cm(-1) were scarcely affected by (15)N-labeling. These results indicated that most of the vibrational modes found in the low-frequency spectrum are derived from the coupling between the Mn-cluster and groups containing nitrogen and/or carbon atom(s) in a direct manner and/or through hydrogen bonding. Interestingly, an intensive band at 577(-) cm(-1) was not affected by (15)N- and (13)C-isotope labeling, indicating that this band arises from the mode that does not include either nitrogen or carbon atoms, such as the skeletal vibration of the Mn-cluster or stretching vibrational modes of the Mn-ligand.

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Year:  2003        PMID: 14609327     DOI: 10.1021/bi035420q

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Redox potential of the terminal quinone electron acceptor QB in photosystem II reveals the mechanism of electron transfer regulation.

Authors:  Yuki Kato; Ryo Nagao; Takumi Noguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-29       Impact factor: 11.205

Review 2.  Light-induced FTIR difference spectroscopy as a powerful tool toward understanding the molecular mechanism of photosynthetic oxygen evolution.

Authors:  Takumi Noguchi
Journal:  Photosynth Res       Date:  2007-02-06       Impact factor: 3.573

3.  Protein Ligation of the Photosynthetic Oxygen-Evolving Center.

Authors:  Richard J Debus
Journal:  Coord Chem Rev       Date:  2008-02       Impact factor: 22.315

4.  Evidence from FTIR difference spectroscopy of an extensive network of hydrogen bonds near the oxygen-evolving Mn(4)Ca cluster of photosystem II involving D1-Glu65, D2-Glu312, and D1-Glu329.

Authors:  Rachel J Service; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

5.  Studies on photosynthetic oxygen-evolving complex by means of Fourier transform infrared spectroscopy: calcium and chloride cofactors.

Authors:  Yukihiro Kimura; Koji Hasegawa; Toshihiro Yamanari; Taka-aki Ono
Journal:  Photosynth Res       Date:  2005-06       Impact factor: 3.573

6.  D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZ for proton exit during water oxidation.

Authors:  Ryo Nagao; Hanayo Ueoka-Nakanishi; Takumi Noguchi
Journal:  J Biol Chem       Date:  2017-10-18       Impact factor: 5.157

7.  Participation of glutamate-354 of the CP43 polypeptide in the ligation of manganese and the binding of substrate water in photosystem II.

Authors:  Rachel J Service; Junko Yano; Iain McConnell; Hong Jin Hwang; Dimitri Niks; Russ Hille; Tom Wydrzynski; Robert L Burnap; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2010-12-08       Impact factor: 3.162

8.  Glutamate-354 of the CP43 polypeptide interacts with the oxygen-evolving Mn4Ca cluster of photosystem II: a preliminary characterization of the Glu354Gln mutant.

Authors:  Melodie A Strickler; Hong Jin Hwang; Robert L Burnap; Junko Yano; Lee M Walker; Rachel J Service; R David Britt; Warwick Hillier; Richard J Debus
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-03-27       Impact factor: 6.237

Review 9.  FTIR detection of water reactions in the oxygen-evolving centre of photosystem II.

Authors:  Takumi Noguchi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-03-27       Impact factor: 6.237

10.  Substitution of the D1-Asn87 site in photosystem II of cyanobacteria mimics the chloride-binding characteristics of spinach photosystem II.

Authors:  Gourab Banerjee; Ipsita Ghosh; Christopher J Kim; Richard J Debus; Gary W Brudvig
Journal:  J Biol Chem       Date:  2017-12-20       Impact factor: 5.157

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