Literature DB >> 14599739

Nucleic acid structures and enzymes in the immunoglobulin class switch recombination mechanism.

Kefei Yu1, Michael R Lieber.   

Abstract

Class switch recombination is the gene rearrangement process by which our B lymphocytes change from IgM production to IgG, IgA, or IgE. Unlike the well-characterized V(D)J recombination, the mechanism of class switch recombination has been largely enigmatic until very recent progress has begun to shed light on this gene rearrangement process. Progress has been made on the enzymes involved in leading to the DNA cleavage events and on identifying the unusual DNA structures that those enzymes recognize.

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Year:  2003        PMID: 14599739     DOI: 10.1016/j.dnarep.2003.08.010

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  44 in total

Review 1.  Combinatorial mechanisms regulating AID-dependent DNA deamination: interacting proteins and post-translational modifications.

Authors:  Bao Q Vuong; Jayanta Chaudhuri
Journal:  Semin Immunol       Date:  2012-07-06       Impact factor: 11.130

2.  The repetitive portion of the Xenopus IgH Mu switch region mediates orientation-dependent class switch recombination.

Authors:  Zheng Z Zhang; Nicholas R Pannunzio; Zhengfei Lu; Ellen Hsu; Kefei Yu; Michael R Lieber
Journal:  Mol Immunol       Date:  2015-08-12       Impact factor: 4.407

3.  Mechanism of R-loop formation at immunoglobulin class switch sequences.

Authors:  Deepankar Roy; Kefei Yu; Michael R Lieber
Journal:  Mol Cell Biol       Date:  2007-10-22       Impact factor: 4.272

4.  Downstream boundary of chromosomal R-loops at murine switch regions: implications for the mechanism of class switch recombination.

Authors:  Feng-Ting Huang; Kefei Yu; Chih-Lin Hsieh; Michael R Lieber
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-17       Impact factor: 11.205

5.  Fine-structure analysis of activation-induced deaminase accessibility to class switch region R-loops.

Authors:  Kefei Yu; Deepankar Roy; Melina Bayramyan; Ian S Haworth; Michael R Lieber
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

6.  Sequence dependence of chromosomal R-loops at the immunoglobulin heavy-chain Smu class switch region.

Authors:  Feng-Ting Huang; Kefei Yu; Barbara B Balter; Erik Selsing; Zeliha Oruc; Ahmed Amine Khamlichi; Chih-Lin Hsieh; Michael R Lieber
Journal:  Mol Cell Biol       Date:  2007-06-11       Impact factor: 4.272

Review 7.  Regulation of immunoglobulin class-switch recombination: choreography of noncoding transcription, targeted DNA deamination, and long-range DNA repair.

Authors:  Allysia J Matthews; Simin Zheng; Lauren J DiMenna; Jayanta Chaudhuri
Journal:  Adv Immunol       Date:  2014       Impact factor: 3.543

8.  Apurinic/apyrimidinic endonuclease 1 is the essential nuclease during immunoglobulin class switch recombination.

Authors:  Shahnaz Masani; Li Han; Kefei Yu
Journal:  Mol Cell Biol       Date:  2013-02-04       Impact factor: 4.272

9.  V-region mutation in vitro, in vivo, and in silico reveal the importance of the enzymatic properties of AID and the sequence environment.

Authors:  Thomas MacCarthy; Susan L Kalis; Sergio Roa; Phuong Pham; Myron F Goodman; Matthew D Scharff; Aviv Bergman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-14       Impact factor: 11.205

Review 10.  Mechanisms of chromosomal rearrangement in the human genome.

Authors:  Albert G Tsai; Michael R Lieber
Journal:  BMC Genomics       Date:  2010-02-10       Impact factor: 3.969

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