Literature DB >> 14596621

NMR structure and dynamics of the second transmembrane domain of the neuronal acetylcholine receptor beta 2 subunit.

Victor E Yushmanov1, Yan Xu, Pei Tang.   

Abstract

Structure and backbone dynamics of a selectively [(15)N]Leu-labeled 28-residue segment of the extended second transmembrane domain (TM2e) of the human neuronal nicotinic acetylcholine receptor (nAChR) beta(2) subunit were studied by (1)H and (15)N solution-state NMR in dodecylphosphocholine micelles. The TM2e structure was determined on the basis of the nuclear Overhauser effects (NOEs) and the hydrogen bond restraints, which were inferred from the presence of H(alpha)(i)-H(N)(i+3), H(alpha)(i)-H(beta)(i+3), and H(alpha)(i)-H(N)(i+4) NOE connectivity and from the slow amide hydrogen exchange with D(2)O. The TM2e structure of the nAChR beta(2) subunit contains a helical region between T4 and K22. Backbone dynamics were calculated using the model-free approach based on the (15)N relaxation rate constants, R(1) and R(2), and on the (15)N-[(1)H] NOE. The data acquired at 9.4 and 14.1 T and calculations using different dynamic models demonstrated no conformational exchange and internal motions on the nanosecond time scale. The global tumbling time of TM2e in micelles was 14.4 +/- 0.2 ns; the NOE values were greater than 0.63 at 9.4 T, and the order parameter, S(2), was 0.83-0.96 for all (15)N-labeled leucine residues, suggesting a restricted internal motion. This is the first report of NMR structure and backbone dynamics of the second transmembrane domain of the human nAChR beta(2) subunit in a membrane-mimetic environment, providing the basis for subsequent studies of subunit interactions in the transmembrane domain complex of the neuronal nAChR.

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Year:  2003        PMID: 14596621     DOI: 10.1021/bi0350396

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Four-alpha-helix bundle with designed anesthetic binding pockets. Part I: structural and dynamical analyses.

Authors:  Dejian Ma; Nicole R Brandon; Tanxing Cui; Vasyl Bondarenko; Christian Canlas; Jonas S Johansson; Pei Tang; Yan Xu
Journal:  Biophys J       Date:  2008-02-29       Impact factor: 4.033

2.  NMR structure of the transmembrane domain of the n-acetylcholine receptor beta2 subunit.

Authors:  Vasyl Bondarenko; Tommy Tillman; Yan Xu; Pei Tang
Journal:  Biochim Biophys Acta       Date:  2010-05-02

3.  Structure of the first transmembrane domain of the neuronal acetylcholine receptor beta2 subunit.

Authors:  Vasyl Bondarenko; Yan Xu; Pei Tang
Journal:  Biophys J       Date:  2006-12-01       Impact factor: 4.033

4.  NMR studies of membrane proteins.

Authors:  Gabriel A Cook; Stanley J Opella
Journal:  Methods Mol Biol       Date:  2010

5.  Homology modeling and molecular dynamics simulations of transmembrane domain structure of human neuronal nicotinic acetylcholine receptor.

Authors:  Alexander C Saladino; Yan Xu; Pei Tang
Journal:  Biophys J       Date:  2004-12-01       Impact factor: 4.033

6.  NMR study of general anesthetic interaction with nAChR beta2 subunit.

Authors:  Vasyl Bondarenko; Victor E Yushmanov; Yan Xu; Pei Tang
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

7.  Anesthetic effects on the structure and dynamics of the second transmembrane domains of nAChR alpha4beta2.

Authors:  Tanxing Cui; Christian G Canlas; Yan Xu; Pei Tang
Journal:  Biochim Biophys Acta       Date:  2009-08-26

8.  General anesthetic binding to neuronal alpha4beta2 nicotinic acetylcholine receptor and its effects on global dynamics.

Authors:  Lu Tian Liu; Dan Willenbring; Yan Xu; Pei Tang
Journal:  J Phys Chem B       Date:  2009-09-17       Impact factor: 2.991

Review 9.  Structural answers and persistent questions about how nicotinic receptors work.

Authors:  Gregg B Wells
Journal:  Front Biosci       Date:  2008-05-01
  9 in total

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