Literature DB >> 20419440

NMR studies of membrane proteins.

Gabriel A Cook1, Stanley J Opella.   

Abstract

Nuclear magnetic resonance studies of membrane proteins yield valuable insights into their structure and topology. For example, the tilt angle and rotation of the helices in an ion channel can be determined by solid-state NMR spectroscopy in aligned lipid bilayers. Details about the structure of the protein in aligned phospholipids environments are immediately apparent from inspection of the SAMMY spectrum and the data can be further used for the determination of atomic resolution three-dimensional structures. SAR by NMR is a technique that is well suited for the field of membrane transporter proteins. The experiments on protein/phospholipid samples provide a unique insight into the interaction of drugs and the functional proteins.The advances required to transform solid-state NMR from a spectroscopic technique to a generally applicable method for determining molecular structures included multiple-pulse sequences, double-resonance methods, and separated local field spectroscopy. It also required improvements in instrumentation, especially the use of high-field magnets and efficient probes capable of high-power radio-frequency irradiations at high frequencies. The pace of development is accelerating and the local field is being utilized in an increasing number of ways in spectroscopic investigations of molecular structure and dynamics. Applications to many helical membrane proteins are underway and promise to add to our understanding of membrane proteins in health and disease.

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Year:  2010        PMID: 20419440      PMCID: PMC3760502          DOI: 10.1007/978-1-60761-700-6_14

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  40 in total

1.  A solid-state NMR index of helical membrane protein structure and topology.

Authors:  F M Marassi; S J Opella
Journal:  J Magn Reson       Date:  2000-05       Impact factor: 2.229

Review 2.  NMR-based screening in drug discovery.

Authors:  P J Hajduk; R P Meadows; S W Fesik
Journal:  Q Rev Biophys       Date:  1999-08       Impact factor: 5.318

3.  Specification and visualization of anisotropic interaction tensors in polypeptides and numerical simulations in biological solid-state NMR.

Authors:  Mads Bak; Robert Schultz; Thomas Vosegaard; Niels Chr Nielsen
Journal:  J Magn Reson       Date:  2002-01       Impact factor: 2.229

4.  Structure of the transmembrane region of the M2 protein H(+) channel.

Authors:  J Wang; S Kim; F Kovacs; T A Cross
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

5.  Structure and topology of a peptide segment of the 6th transmembrane domain of the Saccharomyces cerevisae alpha-factor receptor in phospholipid bilayers.

Authors:  K G Valentine; S F Liu; F M Marassi; G Veglia; S J Opella; F X Ding; S H Wang; B Arshava; J M Becker; F Naider
Journal:  Biopolymers       Date:  2001-10-05       Impact factor: 2.505

6.  Structures of gramicidins A, B, and C incorporated into sodium dodecyl sulfate micelles.

Authors:  L E Townsley; W A Tucker; S Sham; J F Hinton
Journal:  Biochemistry       Date:  2001-10-02       Impact factor: 3.162

7.  Lanthanide ions bind specifically to an added "EF-hand" and orient a membrane protein in micelles for solution NMR spectroscopy.

Authors:  C Ma; S J Opella
Journal:  J Magn Reson       Date:  2000-10       Impact factor: 2.229

8.  Structure of the Rhodobacter sphaeroides light-harvesting 1 beta subunit in detergent micelles.

Authors:  Paul L Sorgen; Sean M Cahill; Ray D Krueger-Koplin; Suzanne T Krueger-Koplin; Craig C Schenck; Mark E Girvin
Journal:  Biochemistry       Date:  2002-01-08       Impact factor: 3.162

9.  Three-dimensional structure of the transmembrane domain of Vpu from HIV-1 in aligned phospholipid bicelles.

Authors:  Sang Ho Park; Anna A De Angelis; Alexander A Nevzorov; Chin H Wu; Stanley J Opella
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

10.  Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel.

Authors:  James J Chou; Joshua D Kaufman; Stephen J Stahl; Paul T Wingfield; Ad Bax
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

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  1 in total

Review 1.  Comparative NMR studies demonstrate profound differences between two viroporins: p7 of HCV and Vpu of HIV-1.

Authors:  Gabriel A Cook; Hua Zhang; Sang Ho Park; Yan Wang; Stanley J Opella
Journal:  Biochim Biophys Acta       Date:  2010-08-18
  1 in total

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