Literature DB >> 14580206

Roles of cytoplasmic osmolytes, water, and crowding in the response of Escherichia coli to osmotic stress: biophysical basis of osmoprotection by glycine betaine.

Scott Cayley1, M Thomas Record.   

Abstract

To better understand the biophysical basis of osmoprotection by glycine betaine (GB) and the roles of cytoplasmic osmolytes, water, and macromolecular crowding in the growth of osmotically stressed Escherichia coli, we have determined growth rates and amounts of GB, K(+), trehalose, biopolymers, and water in the cytoplasm of E. coli K-12 grown over a wide range of high external osmolalities (1.02-2.17 Osm) in MOPS-buffered minimal medium (MBM) containing 1 mM betaine (MBM+GB). As osmolality increases, we observe that the amount of cytoplasmic GB increases, the amounts of K(+) (the other major cytoplasmic solute) and of biopolymers remain relatively constant, and the growth rate and the amount of cytoplasmic water decrease strongly, so concentrations of biopolymers and all solutes increase with increasing osmolality. We observe the same correlation between the growth rate and the amount of cytoplasmic water for cells grown in MBM+GB as in MBM, supporting our proposal that the amount of cytoplasmic water is a primary determinant of the growth rate of osmotically stressed cells. We also observe the same correlation between cytoplasmic concentrations of biopolymers and K(+) for cells grown in MBM and MBM+GB, consistent with our hypothesis of compensation between the anticipated large perturbing effects on cytoplasmic protein-DNA interactions of increases in cytoplasmic concentrations of K(+) and biopolymers (crowding) with increasing osmolality. For growth conditions where the amount of cytoplasmic water is relatively large, we find that cytoplasmic osmolality is adequately predicted by assuming that contributions of individual solutes to osmolality are additive and using in vitro osmotic data on osmolytes and a local bulk domain model for cytoplasmic water. At moderate growth osmolalities (up to 1 Osm), we conclude that GB is an efficient osmoprotectant because it is almost as excluded from the biopolymer surface in the cytoplasm as it is from native protein surface in vitro. At very high growth osmolalities where cells contain little cytoplasmic water, predicted cytoplasmic osmolalities greatly exceed observed osmolalities, and the efficiency of GB as an osmolality booster decreases as the amount of cytoplasmic water decreases.

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Year:  2003        PMID: 14580206     DOI: 10.1021/bi0347297

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  57 in total

1.  Inhibition of protein aggregation in vitro and in vivo by a natural osmoprotectant.

Authors:  Zoya Ignatova; Lila M Gierasch
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-09       Impact factor: 11.205

2.  From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein.

Authors:  Zoya Ignatova; Beena Krishnan; Jeffrey P Bombardier; Anna Marie C Marcelino; Jiang Hong; Lila M Gierasch
Journal:  Biopolymers       Date:  2007       Impact factor: 2.505

3.  Crowding and confinement effects on protein diffusion in vivo.

Authors:  Michael C Konopka; Irina A Shkel; Scott Cayley; M Thomas Record; James C Weisshaar
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

4.  Osmotic Shock Induced Protein Destabilization in Living Cells and Its Reversal by Glycine Betaine.

Authors:  Samantha S Stadmiller; Annelise H Gorensek-Benitez; Alex J Guseman; Gary J Pielak
Journal:  J Mol Biol       Date:  2017-03-03       Impact factor: 5.469

5.  Analysis of strains lacking known osmolyte accumulation mechanisms reveals contributions of osmolytes and transporters to protection against abiotic stress.

Authors:  Lindsay Murdock; Tangi Burke; Chelsea Coumoundouros; Doreen E Culham; Charles E Deutch; James Ellinger; Craig H Kerr; Samantha M Plater; Eric To; Geordie Wright; Janet M Wood
Journal:  Appl Environ Microbiol       Date:  2014-06-20       Impact factor: 4.792

6.  In Vivo Titration of Folate Pathway Enzymes.

Authors:  Deepika Nambiar; Timkhite-Kulu Berhane; Robert Shew; Bryan Schwarz; Michael R Duff; Elizabeth E Howell
Journal:  Appl Environ Microbiol       Date:  2018-09-17       Impact factor: 4.792

7.  Quantifying the temperature dependence of glycine-betaine RNA duplex destabilization.

Authors:  Jeffrey J Schwinefus; Ryan J Menssen; James M Kohler; Elliot C Schmidt; Alexandra L Thomas
Journal:  Biochemistry       Date:  2013-11-22       Impact factor: 3.162

8.  Cytoplasmic protein mobility in osmotically stressed Escherichia coli.

Authors:  Michael C Konopka; Kem A Sochacki; Benjamin P Bratton; Irina A Shkel; M Thomas Record; James C Weisshaar
Journal:  J Bacteriol       Date:  2008-10-24       Impact factor: 3.490

9.  Quantifying green fluorescent protein diffusion in Escherichia coli by using continuous photobleaching with evanescent illumination.

Authors:  Kristin M Slade; Bridgett L Steele; Gary J Pielak; Nancy L Thompson
Journal:  J Phys Chem B       Date:  2009-04-09       Impact factor: 2.991

10.  Organic and inorganic mercurials have distinct effects on cellular thiols, metal homeostasis, and Fe-binding proteins in Escherichia coli.

Authors:  Stephen P LaVoie; Daphne T Mapolelo; Darin M Cowart; Benjamin J Polacco; Michael K Johnson; Robert A Scott; Susan M Miller; Anne O Summers
Journal:  J Biol Inorg Chem       Date:  2015-10-26       Impact factor: 3.358

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