Literature DB >> 14579331

Novel use of a genetic algorithm for protein structure prediction: searching template and sequence alignment space.

Bruno Contreras-Moreira1, Paul W Fitzjohn, Marc Offman, Graham R Smith, Paul A Bates.   

Abstract

A novel genetic algorithm was applied to all CASP5 targets. The algorithm simultaneously searches template and alignment space. Results show that the current implementation of the method is perhaps most useful in recognizing and refining remote homology targets. This new method is briefly described and results are analyzed. Strengths and weaknesses of the current implementation of the algorithm are discussed. Copyright 2003 Wiley-Liss, Inc.

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Year:  2003        PMID： 14579331     DOI： 10.1002/prot.10549

Source DB:  PubMed          Journal:  Proteins        ISSN： 0887-3585


  9 in total

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7.  Computational approach for protein structure prediction.

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8.  Evolution-Guided Structural and Functional Analyses of the HERC Family Reveal an Ancient Marine Origin and Determinants of Antiviral Activity.

Authors:  Ermela Paparisto; Matthew W Woods; Macon D Coleman; Seyed A Moghadasi; Divjyot S Kochar; Sean K Tom; Hinissan P Kohio; Richard M Gibson; Taryn J Rohringer; Nina R Hunt; Eric J Di Gravio; Jonathan Y Zhang; Meijuan Tian; Yong Gao; Eric J Arts; Stephen D Barr
Journal:  J Virol       Date:  2018-06-13       Impact factor: 5.103

9.  Prediction of Protein Tertiary Structure via Regularized Template Classification Techniques.

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Journal:  Molecules       Date:  2020-05-26       Impact factor: 4.411
  9 in total

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