Literature DB >> 14578043

Protein-lipid interactions studied with designed transmembrane peptides: role of hydrophobic matching and interfacial anchoring.

Maurits R R de Planque1, J Antoinette Killian.   

Abstract

Biological membranes are characterized by a heterogeneous composition, which is not only manifested in the wide variety of their components, but also in aspects like the lateral organization, topology, and conformation of proteins and lipids. In bringing about the correct membrane structure, protein-lipid interactions can be expected to play a prominent role. The extent of hydrophobic matching between transmembrane protein segments and lipids potentially constitutes a versatile director of membrane organization, because a tendency to avoid hydrophobic mismatch could result in compensating adaptations such as tilt of the transmembrane segment or segregation into distinct domains. Also, interfacial interactions between lipid headgroups and the aromatic and charged residues that typically flank transmembrane domains may act as an organizing element. In this review, we discuss the numerous model studies that have systematically explored the influence of hydrophobic matching and interfacial anchoring on membrane structure. Designed peptides consisting of a polyleucine or polyleucine/alanine hydrophobic stretch, which is flanked on both sides by tryptophan or lysine residues, reflect the general layout of transmembrane protein segments. It is shown for phosphatidylcholine bilayers and for other model membranes that these peptides adapt a transmembrane topology without extensive peptide or lipid adaptations under conditions of hydrophobic matching, but that significant rearrangements can result from hydrophobic mismatch. Moreover, these effects depend on the nature of the flanking residues, implying a modulation of the mismatch response by interfacial interactions of the flanking residues. The implications of these model studies for the organization of biomembranes are discussed in the context of recent experiments with more complex systems.

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Year:  2003        PMID: 14578043     DOI: 10.1080/09687680310001605352

Source DB:  PubMed          Journal:  Mol Membr Biol        ISSN: 0968-7688            Impact factor:   2.857


  106 in total

1.  Interpretation of 2H-NMR experiments on the orientation of the transmembrane helix WALP23 by computer simulations.

Authors:  Luca Monticelli; D Peter Tieleman; Patrick F J Fuchs
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

2.  Assembly of the m2 tetramer is strongly modulated by lipid chain length.

Authors:  Sandra Schick; Lirong Chen; Edwin Li; Janice Lin; Ingo Köper; Kalina Hristova
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

3.  Revisiting hydrophobic mismatch with free energy simulation studies of transmembrane helix tilt and rotation.

Authors:  Taehoon Kim; Wonpil Im
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

4.  Transmembrane peptides influence the affinity of sterols for phospholipid bilayers.

Authors:  Joel H Nyström; Max Lönnfors; Thomas K M Nyholm
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

5.  A Practical Implicit Membrane Potential for NMR Structure Calculations of Membrane Proteins.

Authors:  Ye Tian; Charles D Schwieters; Stanley J Opella; Francesca M Marassi
Journal:  Biophys J       Date:  2015-08-04       Impact factor: 4.033

6.  Peptide model helices in lipid membranes: insertion, positioning, and lipid response on aggregation studied by X-ray scattering.

Authors:  Philipp E Schneggenburger; André Beerlink; Britta Weinhausen; Tim Salditt; Ulf Diederichsen
Journal:  Eur Biophys J       Date:  2010-12-23       Impact factor: 1.733

7.  Interfacial tryptophan residues: a role for the cation-pi effect?

Authors:  Frederic N R Petersen; Morten Ø Jensen; Claus H Nielsen
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

8.  Probing the lipid-protein interface using model transmembrane peptides with a covalently linked acyl chain.

Authors:  Thomas K M Nyholm; Bianca van Duyl; Dirk T S Rijkers; Rob M J Liskamp; J Antoinette Killian
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

9.  Molecular dynamics simulation of transmembrane polypeptide orientational fluctuations.

Authors:  David J Goodyear; Simon Sharpe; Chris W M Grant; Michael R Morrow
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

10.  Membrane protein native state discrimination by implicit membrane models.

Authors:  Olga Yuzlenko; Themis Lazaridis
Journal:  J Comput Chem       Date:  2012-12-07       Impact factor: 3.376

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