Literature DB >> 14576278

The proteome of Saccharomyces cerevisiae mitochondria.

Albert Sickmann1, Jörg Reinders, Yvonne Wagner, Cornelia Joppich, René Zahedi, Helmut E Meyer, Birgit Schönfisch, Inge Perschil, Agnieszka Chacinska, Bernard Guiard, Peter Rehling, Nikolaus Pfanner, Chris Meisinger.   

Abstract

We performed a comprehensive approach to determine the proteome of Saccharomyces cerevisiae mitochondria. The proteins of highly pure yeast mitochondria were separated by several independent methods and analyzed by tandem MS. From >20 million MS spectra, 750 different proteins were identified, indicating an involvement of mitochondria in numerous cellular processes. All known components of the oxidative phosphorylation machinery, the tricarboxylic acid cycle, and the stable mitochondria-encoded proteins were found. Based on the mitochondrial proteins described in the literature so far, we calculate that the identified proteins represent approximately 90% of all mitochondrial proteins. The function of a quarter of the identified proteins is unknown. The mitochondrial proteome will provide an important database for the analysis of new mitochondrial and mitochondria-associated functions and the characterization of mitochondrial diseases.

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Year:  2003        PMID: 14576278      PMCID: PMC263752          DOI: 10.1073/pnas.2135385100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

1.  Protein import channel of the outer mitochondrial membrane: a highly stable Tom40-Tom22 core structure differentially interacts with preproteins, small tom proteins, and import receptors.

Authors:  C Meisinger; M T Ryan; K Hill; K Model; J H Lim; A Sickmann; H Müller; H E Meyer; R Wagner; N Pfanner
Journal:  Mol Cell Biol       Date:  2001-04       Impact factor: 4.272

2.  Purification of Saccharomcyes cerevisiae mitochondria devoid of microsomal and cytosolic contaminations.

Authors:  C Meisinger; T Sommer; N Pfanner
Journal:  Anal Biochem       Date:  2000-12-15       Impact factor: 3.365

Review 3.  Mitochondrial genetics and disease.

Authors:  E A Schon
Journal:  Trends Biochem Sci       Date:  2000-11       Impact factor: 13.807

4.  Large-scale analysis of the yeast proteome by multidimensional protein identification technology.

Authors:  M P Washburn; D Wolters; J R Yates
Journal:  Nat Biotechnol       Date:  2001-03       Impact factor: 54.908

5.  Proteomic analysis of the human colon carcinoma cell line (LIM 1215): development of a membrane protein database.

Authors:  R J Simpson; L M Connolly; J S Eddes; J J Pereira; R L Moritz; G E Reid
Journal:  Electrophoresis       Date:  2000-05       Impact factor: 3.535

6.  Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.

Authors:  E A Winzeler; D D Shoemaker; A Astromoff; H Liang; K Anderson; B Andre; R Bangham; R Benito; J D Boeke; H Bussey; A M Chu; C Connelly; K Davis; F Dietrich; S W Dow; M El Bakkoury; F Foury; S H Friend; E Gentalen; G Giaever; J H Hegemann; T Jones; M Laub; H Liao; N Liebundguth; D J Lockhart; A Lucau-Danila; M Lussier; N M'Rabet; P Menard; M Mittmann; C Pai; C Rebischung; J L Revuelta; L Riles; C J Roberts; P Ross-MacDonald; B Scherens; M Snyder; S Sookhai-Mahadeo; R K Storms; S Véronneau; M Voet; G Volckaert; T R Ward; R Wysocki; G S Yen; K Yu; K Zimmermann; P Philippsen; M Johnston; R W Davis
Journal:  Science       Date:  1999-08-06       Impact factor: 47.728

Review 7.  Mitochondrial disorders.

Authors:  A H Schapira
Journal:  Curr Opin Neurol       Date:  2000-10       Impact factor: 5.710

8.  Identification of proteins from human cerebrospinal fluid, separated by two-dimensional polyacrylamide gel electrophoresis.

Authors:  A Sickmann; W Dormeyer; S Wortelkamp; D Woitalla; W Kuhn; H E Meyer
Journal:  Electrophoresis       Date:  2000-07       Impact factor: 3.535

9.  Localizing proteins in the cell from their phylogenetic profiles.

Authors:  E M Marcotte; I Xenarios; A M van Der Bliek; D Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

10.  The dual origin of the yeast mitochondrial proteome.

Authors:  O Karlberg; B Canbäck; C G Kurland; S G Andersson
Journal:  Yeast       Date:  2000-09-30       Impact factor: 3.239

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  304 in total

1.  The Trichomonas vaginalis hydrogenosome proteome is highly reduced relative to mitochondria, yet complex compared with mitosomes.

Authors:  Rachel E Schneider; Mark T Brown; April M Shiflett; Sabrina D Dyall; Richard D Hayes; Yongming Xie; Joseph A Loo; Patricia J Johnson
Journal:  Int J Parasitol       Date:  2011-11-09       Impact factor: 3.981

2.  Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.

Authors:  Joshua L Heazlewood; Julian S Tonti-Filippini; Alexander M Gout; David A Day; James Whelan; A Harvey Millar
Journal:  Plant Cell       Date:  2003-12-11       Impact factor: 11.277

3.  Tob38, a novel essential component in the biogenesis of beta-barrel proteins of mitochondria.

Authors:  Thomas Waizenegger; Shukry J Habib; Maciej Lech; Dejana Mokranjac; Stefan A Paschen; Kai Hell; Walter Neupert; Doron Rapaport
Journal:  EMBO Rep       Date:  2004-06-18       Impact factor: 8.807

4.  Essential role of Mia40 in import and assembly of mitochondrial intermembrane space proteins.

Authors:  Agnieszka Chacinska; Sylvia Pfannschmidt; Nils Wiedemann; Vera Kozjak; Luiza K Sanjuán Szklarz; Agnes Schulze-Specking; Kaye N Truscott; Bernard Guiard; Chris Meisinger; Nikolaus Pfanner
Journal:  EMBO J       Date:  2004-09-09       Impact factor: 11.598

Review 5.  Development of mitochondrial gene replacement therapy.

Authors:  Shaharyar M Khan; James P Bennett
Journal:  J Bioenerg Biomembr       Date:  2004-08       Impact factor: 2.945

Review 6.  The evolutionary processes of mitochondrial and chloroplast genomes differ from those of nuclear genomes.

Authors:  Helena Korpelainen
Journal:  Naturwissenschaften       Date:  2004-09-28

Review 7.  The N-end rule pathway: emerging functions and molecular principles of substrate recognition.

Authors:  Shashikanth M Sriram; Bo Yeon Kim; Yong Tae Kwon
Journal:  Nat Rev Mol Cell Biol       Date:  2011-10-21       Impact factor: 94.444

8.  Mitochondrial biogenesis and function in Arabidopsis.

Authors:  A Harvey Millar; Ian D Small; David A Day; James Whelan
Journal:  Arabidopsis Book       Date:  2008-07-09

9.  ISC1-dependent metabolic adaptation reveals an indispensable role for mitochondria in induction of nuclear genes during the diauxic shift in Saccharomyces cerevisiae.

Authors:  Hiroshi Kitagaki; L Ashley Cowart; Nabil Matmati; David Montefusco; Jason Gandy; Silvia Vaena de Avalos; Sergei A Novgorodov; Jim Zheng; Lina M Obeid; Yusuf A Hannun
Journal:  J Biol Chem       Date:  2009-01-29       Impact factor: 5.157

10.  Plasma membrane localization of Ras requires class C Vps proteins and functional mitochondria in Saccharomyces cerevisiae.

Authors:  Geng Wang; Robert J Deschenes
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

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