Literature DB >> 14573945

A new class of lanthanide complexes to obtain high-phasing-power heavy-atom derivatives for macromolecular crystallography.

Eric Girard1, Meike Stelter, Jean Vicat, Richard Kahn.   

Abstract

Because of their intense white lines and large f" values, lanthanide atoms are of great interest for solving structures of biological macromolecules using single-wavelength anomalous diffraction (SAD) or multiple-wavelength anomalous diffraction (MAD) methods. In this work, a series of seven gadolinium complexes are described which provide excellent derivatives for anomalous diffraction experiments in biological systems. These highly soluble lanthanide complexes can easily be introduced into protein crystals either by soaking or by co-crystallization, without significantly affecting the crystallization conditions, by employing highly concentrated complex solutions ( approximately 100 mM). De novo phasing by the SAD method was carried out with several proteins of known as well as previously unknown structures by employing this new class of heavy-atom compounds. Diffraction data were collected either with a laboratory source, making use of the high anomalous signal (f" = 12 e(-)) of gadolinium with Cu Kalpha radiation, or with synchrotron radiation at the peak of the gadolinium L(III) absorption edge, which exhibits a strong white line (lambda = 1.711 A, f" = 28 e(-)). Using one of these gadolinium complexes, Gd-HPDO3A, the structure of a bacterial chimeric ornithine carbamoyl transferase, OTCase3630, a dodecameric protein of 450 kDa, was determined. Employed with the SAD method, these seven complexes could be of particular interest for high-throughput macromolecular crystallography.

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Year:  2003        PMID: 14573945     DOI: 10.1107/s0907444903020511

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  15 in total

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3.  Engineering encodable lanthanide-binding tags into loop regions of proteins.

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4.  Purification, crystallization and preliminary X-ray analysis of aminoglycoside-2''-phosphotransferase-Ic [APH(2'')-Ic] from Enterococcus gallinarum.

Authors:  Laura J Byrnes; Adriana Badarau; Sergei B Vakulenko; Clyde A Smith
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7.  Crystallization and preliminary X-ray diffraction studies of choline-binding protein F from Streptococcus pneumoniae.

Authors:  Rafael Molina; Ana González; Miriam Moscoso; Pedro García; Meike Stelter; Richard Kahn; Juan A Hermoso
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9.  Crystallization and preliminary X-ray diffraction studies of the pneumococcal teichoic acid phosphorylcholine esterase Pce.

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10.  Structure of the Mediator head module.

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Journal:  Nature       Date:  2012-10-31       Impact factor: 49.962

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