Literature DB >> 14573781

Establishment of stably EBV-transformed cell lines from residual clinical blood samples for use in performance evaluation and quality assurance in molecular genetic testing.

Susan H Bernacki1, Ana K Stankovic, Laurina O Williams, Jeanne C Beck, James E Herndon, Karen Snow-Bailey, Thomas W Prior, Karla J Matteson, Linda M Wasserman, Eugene C Cole, Timothy T Stenzel.   

Abstract

Positive control materials for clinical molecular genetic testing applications are currently in critically short supply or non-existent for many genetically based diseases of public health importance. Here we demonstrate that anonymous, residual, clinical blood samples are potential sources of viable lymphocytes for establishing Epstein-Barr virus (EBV)-transformed blood lymphocyte cell lines. We attempted to transform 34 residual blood samples, and analyzed transformation success with respect to sample age, anticoagulant, storage temperature, volume, hemolysis, and patient age and sex. In univariate analysis, sample age was significantly associated with transformation success (P = 0.002). The success rate was 67% (6 of 9) for samples 1 to 7 days old, 38% (3 of 8) for samples 8 to 14 days old and 0% for samples 15 to 21 (0 of 11) days old. When we controlled for sample age in multivariate logistic regression, anticoagulant and storage temperature approached significance (P = 0.070 and 0.087, respectively; samples in acid citrate dextrose (ACD) and refrigerated samples were more likely to transform). Based on these findings, we suggest that samples collected in either ACD or ethylene diamine tetraacetic acid, and up to 14 days old (refrigerated) or 7 days old (stored ambient), are reasonable candidates for EBV transformation. The transformation rate for samples that met these criteria was 63% (10 of 16). Implementation of this process could help alleviate the shortage of positive control materials for clinical molecular genetic testing.

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Year:  2003        PMID: 14573781      PMCID: PMC1907339          DOI: 10.1016/S1525-1578(10)60478-3

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  10 in total

1.  Incorrect us of "immortalization" for B-lymphoblastoid cell lines transformed by Epstein-Barr virus.

Authors:  M Sugimoto; Y Furuichi; T Ide; M Goto
Journal:  J Virol       Date:  1999-11       Impact factor: 5.103

2.  Successful transformation of cryopreserved lymphocytes: a resource for epidemiological studies.

Authors:  J C Beck; C M Beiswanger; E M John; E Satariano; D West
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2001-05       Impact factor: 4.254

3.  Sample age and Epstein-Barr virus transformation of cryopreserved lymphocytes.

Authors:  J A Reidy; V A Wheeler
Journal:  In Vitro Cell Dev Biol       Date:  1992-06

4.  A greatly simplified method of establishing B-lymphoblastoid cell lines.

Authors:  H Tohda; A Oikawa; T Kudo; T Tachibana
Journal:  Cancer Res       Date:  1978-10       Impact factor: 12.701

5.  A novel approach to establishing permanent lymphoblastoid cell lines: Epstein-Barr virus transformation of cryopreserved lymphocytes.

Authors:  L G Louie; M C King
Journal:  Am J Hum Genet       Date:  1991-03       Impact factor: 11.025

6.  Successful use of long-term frozen lymphocytes for the establishment of lymphoblastoid cell lines.

Authors:  S Tremblay; E W Khandjian
Journal:  Clin Biochem       Date:  1998-10       Impact factor: 3.281

7.  Use of a simple method for the Epstein-Barr virus transformation of lymphocytes from members of large families of Réunion Island.

Authors:  M Ventura; A Gibaud; J Le Pendu; D Hillaire; G Gérard; D Vitrac; R Oriol
Journal:  Hum Hered       Date:  1988       Impact factor: 0.444

8.  Reconsideration of senescence, immortalization and telomere maintenance of Epstein-Barr virus-transformed human B-lymphoblastoid cell lines.

Authors:  M Sugimoto; T Ide; M Goto; Y Furuichi
Journal:  Mech Ageing Dev       Date:  1999-02-01       Impact factor: 5.432

Review 9.  Quality assurance in human molecular genetics testing: status and recommendations.

Authors:  Laurina O Williams; Eugene C Cole; Ira M Lubin; Norma I Iglesias; Ruth L Jordan; Lauren E Elliott
Journal:  Arch Pathol Lab Med       Date:  2003-10       Impact factor: 5.534

10.  Laboratory standards and guidelines for population-based cystic fibrosis carrier screening.

Authors:  W W Grody; G R Cutting; K W Klinger; C S Richards; M S Watson; R J Desnick
Journal:  Genet Med       Date:  2001 Mar-Apr       Impact factor: 8.822

  10 in total
  13 in total

1.  Quest for controls in molecular genetics.

Authors:  Wayne W Grody
Journal:  J Mol Diagn       Date:  2003-11       Impact factor: 5.568

2.  Development of genomic reference materials for cystic fibrosis genetic testing.

Authors:  Victoria M Pratt; Michele Caggana; Christina Bridges; Arlene M Buller; Lisa DiAntonio; W Edward Highsmith; Leonard M Holtegaard; Kasinathan Muralidharan; Elizabeth M Rohlfs; Jack Tarleton; Lorraine Toji; Shannon D Barker; Lisa V Kalman
Journal:  J Mol Diagn       Date:  2009-04-09       Impact factor: 5.568

3.  NDUFV2 pseudogene (NDUFV2P1) contributes to mitochondrial complex I deficits in schizophrenia.

Authors:  Oded Bergman; Rachel Karry; Jumana Milhem; Dorit Ben-Shachar
Journal:  Mol Psychiatry       Date:  2018-12-10       Impact factor: 15.992

4.  Development and characterization of reference materials for MTHFR, SERPINA1, RET, BRCA1, and BRCA2 genetic testing.

Authors:  Shannon D Barker; Sherri Bale; Jessica Booker; Arlene Buller; Soma Das; Kenneth Friedman; Andrew K Godwin; Wayne W Grody; Edward Highsmith; Jeffery A Kant; Elaine Lyon; Rong Mao; Kristin G Monaghan; Deborah A Payne; Victoria M Pratt; Iris Schrijver; Antony E Shrimpton; Elaine Spector; Milhan Telatar; Lorraine Toji; Karen Weck; Barbara Zehnbauer; Lisa V Kalman
Journal:  J Mol Diagn       Date:  2009-09-18       Impact factor: 5.568

5.  Development of a genomic DNA reference material panel for Rett syndrome (MECP2-related disorders) genetic testing.

Authors:  Lisa V Kalman; Jack C Tarleton; Alan K Percy; Swaroop Aradhya; Sherri Bale; Shannon D Barker; Pinar Bayrak-Toydemir; Christina Bridges; Arlene M Buller-Burckle; Soma Das; Ramaswamy K Iyer; Timothy D Vo; Val V Zvereff; Lorraine H Toji
Journal:  J Mol Diagn       Date:  2014-02-07       Impact factor: 5.568

6.  Quality assurance for Duchenne and Becker muscular dystrophy genetic testing: development of a genomic DNA reference material panel.

Authors:  Lisa Kalman; Jay Leonard; Norman Gerry; Jack Tarleton; Christina Bridges; Julie M Gastier-Foster; Robert E Pyatt; Eileen Stonerock; Monique A Johnson; C Sue Richards; Iris Schrijver; Tianhui Ma; Vanessa Rangel Miller; Yetsa Adadevoh; Pat Furlong; Christine Beiswanger; Lorraine Toji
Journal:  J Mol Diagn       Date:  2011-03       Impact factor: 5.568

7.  A novel method for creating artificial mutant samples for performance evaluation and quality control in clinical molecular genetics.

Authors:  Michael Jarvis; Ramaswamy K Iyer; Laurina O Williams; Walter W Noll; Kirk Thomas; Milhan Telatar; Wayne W Grody
Journal:  J Mol Diagn       Date:  2005-05       Impact factor: 5.568

8.  Haploinsufficiency of KDM6A is associated with severe psychomotor retardation, global growth restriction, seizures and cleft palate.

Authors:  Amelia M Lindgren; Tatiana Hoyos; Michael E Talkowski; Carrie Hanscom; Ian Blumenthal; Colby Chiang; Carl Ernst; Shahrin Pereira; Zehra Ordulu; Carol Clericuzio; Joanne M Drautz; Jill A Rosenfeld; Lisa G Shaffer; Lea Velsher; Tania Pynn; Joris Vermeesch; David J Harris; James F Gusella; Eric C Liao; Cynthia C Morton
Journal:  Hum Genet       Date:  2013-01-25       Impact factor: 4.132

9.  Development of a genomic DNA reference material panel for myotonic dystrophy type 1 (DM1) genetic testing.

Authors:  Lisa Kalman; Jack Tarleton; Monica Hitch; Madhuri Hegde; Nick Hjelm; Elizabeth Berry-Kravis; Lili Zhou; James E Hilbert; Elizabeth A Luebbe; Richard T Moxley; Lorraine Toji
Journal:  J Mol Diagn       Date:  2013-05-13       Impact factor: 5.568

10.  Proteomics of transformed lymphocytes from a family with familial pulmonary arterial hypertension.

Authors:  Barbara O Meyrick; David B Friedman; D Dean Billheimer; Joy D Cogan; Melissa A Prince; John A Phillips; James E Loyd
Journal:  Am J Respir Crit Care Med       Date:  2007-10-11       Impact factor: 21.405

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