Literature DB >> 14563129

Phylogenetic relationships of the genus Phanerochaete inferred from the internal transcribed spacer region.

Theodorus H de Koker1, Karen K Nakasone, Jacques Haarhof, Harold H Burdsall, Bernard J H Janse.   

Abstract

Phanerochaete is a genus of resupinate homobasidiomycetes that are saprophytic on woody debris and logs. Morphological studies in the past indicated that Phanerochaete is a heterogeneous assemblage of species. In this study the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA was used to test the monophyly of the genus Phanerocthaete and to infer phylogenetic relationships of the 24 taxa studied. Maximum parsimony, maximum likelihood, and Bayesian analyses do not support the monophyly of the genus. However, a core group of species represented by Phanerochaete velutina, P. chrysosporium, P. sordida, P. sanguinea and others are closely related and group together in a clade. Other common Phanerochaete species including Phanerochaete rimosa, P. chrysorhiza, P. omnivora, P. avellanea, P. tiberculata, P. flava, and P. allantospora, however, do not cluster with the core Phanerochaete group.

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Year:  2003        PMID: 14563129     DOI: 10.1017/s095375620300827x

Source DB:  PubMed          Journal:  Mycol Res        ISSN: 0953-7562


  7 in total

1.  Degrading ability of oligocyclic aromates by Phanerochaete sordida selected via screening of white rot fungi.

Authors:  H Lee; Y-S Choi; M-J Kim; N-Y Huh; G-H Kim; Y W Lim; S-M Kang; S-T Cho; J-J Kim
Journal:  Folia Microbiol (Praha)       Date:  2010-10-13       Impact factor: 2.099

Review 2.  Coriolopsis rigida, a potential model of white-rot fungi that produce extracellular laccases.

Authors:  Mario C N Saparrat; Pedro A Balatti; Angélica M Arambarri; María J Martínez
Journal:  J Ind Microbiol Biotechnol       Date:  2014-02-12       Impact factor: 3.346

3.  Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize.

Authors:  Hitoshi Suzuki; Jacqueline MacDonald; Khajamohiddin Syed; Asaf Salamov; Chiaki Hori; Andrea Aerts; Bernard Henrissat; Ad Wiebenga; Patricia A VanKuyk; Kerrie Barry; Erika Lindquist; Kurt LaButti; Alla Lapidus; Susan Lucas; Pedro Coutinho; Yunchen Gong; Masahiro Samejima; Radhakrishnan Mahadevan; Mamdouh Abou-Zaid; Ronald P de Vries; Kiyohiko Igarashi; Jagjit S Yadav; Igor V Grigoriev; Emma R Master
Journal:  BMC Genomics       Date:  2012-09-02       Impact factor: 3.969

4.  Lignocellulose-converting enzyme activity profiles correlate with molecular systematics and phylogeny grouping in the incoherent genus Phlebia (Polyporales, Basidiomycota).

Authors:  Jaana Kuuskeri; Miia R Mäkelä; Jarkko Isotalo; Ilona Oksanen; Taina Lundell
Journal:  BMC Microbiol       Date:  2015-10-19       Impact factor: 3.605

5.  Hydnophanerochaete and Odontoefibula, two new genera of phanerochaetoid fungi (Polyporales, Basidiomycota) from East Asia.

Authors:  Che-Chih Chen; Sheng-Hua Wu; Chi-Yu Chen
Journal:  MycoKeys       Date:  2018-09-17       Impact factor: 2.984

6.  Global Phylogeny and Taxonomy of the Wood-Decaying Fungal Genus Phlebiopsis (Polyporales, Basidiomycota).

Authors:  Ya-Nan Zhao; Shuang-Hui He; Karen K Nakasone; K L Wasantha Kumara; Che-Chih Chen; Shi-Liang Liu; Hai-Xia Ma; Man-Rong Huang
Journal:  Front Microbiol       Date:  2021-02-10       Impact factor: 5.640

7.  Global Taxonomy and Phylogeny of Irpicaceae (Polyporales, Basidiomycota) With Descriptions of Seven New Species and Proposals of Two New Combinations.

Authors:  Yue Li; Shuang-Hui He; Che-Chih Chen; Karen K Nakasone; Hai-Xia Ma
Journal:  Front Microbiol       Date:  2022-06-20       Impact factor: 6.064

  7 in total

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