Literature DB >> 14562966

Phylogenetic analysis of new plant myosin sequences.

Magdalena Bezanilla1, Amy C Horton, Heather C Sevener, Ralph S Quatrano.   

Abstract

We have sampled a large number of plant taxa, ranging from brown algae to angiosperms, for the presence of myosin sequences. Using phylogenetic analysis, we show that all but two of the new plant myosin sequences fall into two of three preexisting myosin classes. We identified two outlying sequences, which do not fall into any preexisting myosin class. Additionally, all genomic sequences encoding class XI myosins contain an intron in the region studied, suggesting that this genomic region has been conserved over at least 1 billion years of plant evolution. With these data, we can rapidly and consistently classify partial myosin sequences from plants. Our data show that plant myosins do not have clear orthologues in other kingdoms, providing interesting insights into the diversification of myosins.

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Year:  2003        PMID: 14562966     DOI: 10.1007/s00239-003-2469-7

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  24 in total

1.  Statistical tests of gamma-distributed rate heterogeneity in models of sequence evolution in phylogenetics.

Authors:  N Goldman; S Whelan
Journal:  Mol Biol Evol       Date:  2000-06       Impact factor: 16.240

2.  Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants.

Authors:  K M Pryer; H Schneider; A R Smith; R Cranfill; P G Wolf; J S Hunt; S D Sipes
Journal:  Nature       Date:  2001-02-01       Impact factor: 49.962

3.  Hamy3, a novel type 100 kDa myosin from sunflower.

Authors:  Oliver Vugrek; Barbara Moepps
Journal:  J Exp Bot       Date:  2002-04       Impact factor: 6.992

4.  Modeling amino acid replacement.

Authors:  T Müller; M Vingron
Journal:  J Comput Biol       Date:  2000       Impact factor: 1.479

5.  Maize myosins: diversity, localization, and function.

Authors:  L Liu; J Zhou; T C Pesacreta
Journal:  Cell Motil Cytoskeleton       Date:  2001-02

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Identification of protein coding regions by database similarity search.

Authors:  W Gish; D J States
Journal:  Nat Genet       Date:  1993-03       Impact factor: 38.330

Review 8.  A millennial myosin census.

Authors:  J S Berg; B C Powell; R E Cheney
Journal:  Mol Biol Cell       Date:  2001-04       Impact factor: 4.138

9.  A kinesin family tree.

Authors:  A J Kim; S A Endow
Journal:  J Cell Sci       Date:  2000-11       Impact factor: 5.285

10.  Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence.

Authors:  A S Reddy; I S Day
Journal:  Genome Biol       Date:  2001-07-03       Impact factor: 13.583

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  11 in total

1.  Arabidopsis myosin XI mutant is defective in organelle movement and polar auxin transport.

Authors:  Carola Holweg; Peter Nick
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-06       Impact factor: 11.205

2.  Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction.

Authors:  Saeko Hamada; Hiroyuki Sekimoto; Yoichi Tanabe; Yuki Tsuchikane; Motomi Ito
Journal:  J Plant Res       Date:  2006-02-03       Impact factor: 2.629

3.  Expression, splicing, and evolution of the myosin gene family in plants.

Authors:  Valera V Peremyslov; Todd C Mockler; Sergei A Filichkin; Samuel E Fox; Pankaj Jaiswal; Kira S Makarova; Eugene V Koonin; Valerian V Dolja
Journal:  Plant Physiol       Date:  2011-01-13       Impact factor: 8.340

4.  Class XI myosins are required for development, cell expansion, and F-Actin organization in Arabidopsis.

Authors:  Valera V Peremyslov; Alexey I Prokhnevsky; Valerian V Dolja
Journal:  Plant Cell       Date:  2010-06-25       Impact factor: 11.277

5.  Phototropin Mediated Relocation of Myosins in Arabidopsis thaliana.

Authors:  Weronika Krzeszowiec; Halina Gabryś
Journal:  Plant Signal Behav       Date:  2007-09

6.  Subnuclear compartmentalization and function of actin and nuclear myosin I in plants.

Authors:  J R Cruz; S Moreno Díaz de la Espina
Journal:  Chromosoma       Date:  2008-11-04       Impact factor: 4.316

7.  Myosin XI-K Is required for rapid trafficking of Golgi stacks, peroxisomes, and mitochondria in leaf cells of Nicotiana benthamiana.

Authors:  Dror Avisar; Alexey I Prokhnevsky; Kira S Makarova; Eugene V Koonin; Valerian V Dolja
Journal:  Plant Physiol       Date:  2008-01-04       Impact factor: 8.340

8.  Class VIII myosins are required for plasmodesmatal localization of a closterovirus Hsp70 homolog.

Authors:  Dror Avisar; Alexey I Prokhnevsky; Valerian V Dolja
Journal:  J Virol       Date:  2008-01-16       Impact factor: 5.103

9.  Overlapping functions of the four class XI myosins in Arabidopsis growth, root hair elongation, and organelle motility.

Authors:  Alexey I Prokhnevsky; Valera V Peremyslov; Valerian V Dolja
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-05       Impact factor: 11.205

10.  Association of six YFP-myosin XI-tail fusions with mobile plant cell organelles.

Authors:  Daniel Reisen; Maureen R Hanson
Journal:  BMC Plant Biol       Date:  2007-02-09       Impact factor: 4.215

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