Literature DB >> 14557109

Combining biomarkers to detect disease with application to prostate cancer.

Ruth Etzioni1, Charles Kooperberg, Margaret Pepe, Robert Smith, Peter H Gann.   

Abstract

In early detection of disease, combinations of biomarkers promise improved discrimination over diagnostic tests based on single markers. An example of this is in prostate cancer screening, where additional markers have been sought to improve the specificity of the conventional Prostate-Specific Antigen (PSA) test. A marker of particular interest is the percent free PSA. Studies evaluating the benefits of percent free PSA reflect the need for a methodological approach that is statistically valid and useful in the clinical setting. This article presents methods that address this need. We focus on and-or combinations of biomarker results that we call logic rules and present novel definitions for the ROC curve and the area under the curve (AUC) that are applicable to this class of combination tests. Our estimates of the ROC and AUC are amenable to statistical inference including comparisons of tests and regression analysis. The methods are applied to data on free and total PSA levels among prostate cancer cases and matched controls enrolled in the Physicians' Health Study.

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Year:  2003        PMID: 14557109     DOI: 10.1093/biostatistics/4.4.523

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  33 in total

1.  Preclinical validation of salivary biomarkers for primary Sjögren's syndrome.

Authors:  Shen Hu; Kai Gao; Rodney Pollard; Martha Arellano-Garcia; Hui Zhou; Lei Zhang; David Elashoff; Cees G M Kallenberg; Arjan Vissink; David T Wong
Journal:  Arthritis Care Res (Hoboken)       Date:  2010-07-08       Impact factor: 4.794

2.  Logic Forest: an ensemble classifier for discovering logical combinations of binary markers.

Authors:  Bethany J Wolf; Elizabeth G Hill; Elizabeth H Slate
Journal:  Bioinformatics       Date:  2010-07-13       Impact factor: 6.937

3.  A serial risk score approach to disease classification that accounts for accuracy and cost.

Authors:  Dat Huynh; Oliver Laeyendecker; Ron Brookmeyer
Journal:  Biometrics       Date:  2014-08-25       Impact factor: 2.571

4.  Urinary biomarkers to detect acute kidney injury in the pediatric emergency center.

Authors:  Yue Du; Michael Zappitelli; Asad Mian; Michael Bennett; Qing Ma; Prasad Devarajan; Ravindra Mehta; Stuart L Goldstein
Journal:  Pediatr Nephrol       Date:  2010-10-27       Impact factor: 3.714

5.  Combining multiple biomarker models in logistic regression.

Authors:  Zheng Yuan; Debashis Ghosh
Journal:  Biometrics       Date:  2008-03-05       Impact factor: 2.571

6.  Method to quantify cytokines and chemokines in mouse brain tissue using Bio-Plex multiplex immunoassays.

Authors:  Monica Manglani; Rejane Rua; Amy Hendricksen; Daniel Braunschweig; Qian Gao; Woei Tan; Brett Houser; Dorian B McGavern; Kenneth Oh
Journal:  Methods       Date:  2019-02-10       Impact factor: 3.608

7.  Sequential Validation of Blood-Based Protein Biomarker Candidates for Early-Stage Pancreatic Cancer.

Authors:  Michela Capello; Leonidas E Bantis; Ghislaine Scelo; Yang Zhao; Peng Li; Dilsher S Dhillon; Nikul J Patel; Deepali L Kundnani; Hong Wang; James L Abbruzzese; Anirban Maitra; Margaret A Tempero; Randall Brand; Matthew A Firpo; Sean J Mulvihill; Matthew H Katz; Paul Brennan; Ziding Feng; Ayumu Taguchi; Samir M Hanash
Journal:  J Natl Cancer Inst       Date:  2017-04-01       Impact factor: 13.506

8.  Assessing the incremental value of new biomarkers based on OR rules.

Authors:  Lu Wang; Alexander R Luedtke; Ying Huang
Journal:  Biostatistics       Date:  2020-07-01       Impact factor: 5.899

9.  ROC analysis for multiple markers with tree-based classification.

Authors:  Mei-Cheng Wang; Shanshan Li
Journal:  Lifetime Data Anal       Date:  2012-10-10       Impact factor: 1.588

10.  Linear combination methods to improve diagnostic/prognostic accuracy on future observations.

Authors:  Le Kang; Aiyi Liu; Lili Tian
Journal:  Stat Methods Med Res       Date:  2013-04-16       Impact factor: 3.021

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