Literature DB >> 14557045

Forward genetics and map-based cloning approaches.

Janny L Peters1, Filip Cnudde, Tom Gerats.   

Abstract

Whereas reverse genetics strategies seek to identify and select mutations in a known sequence, forward genetics requires the cloning of sequences underlying a particular mutant phenotype. Map-based cloning is tedious, hampering the quick identification of candidate genes. With the unprecedented progress in the sequencing of whole genomes, and perhaps even more with the development of saturating marker technologies, map-based cloning can now be performed so efficiently that, at least for some plant model systems, it has become feasible to identify some candidate genes within a few months. This, in turn, will boost the use of forward genetics approaches, as applied (for example) to isolating genes involved in natural variation and genes causing phenotypic mutations as derived from (second-site) mutagenesis screens.

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Year:  2003        PMID: 14557045     DOI: 10.1016/j.tplants.2003.09.002

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  47 in total

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2.  Gene discovery using mutagen-induced polymorphisms and deep sequencing: application to plant disease resistance.

Authors:  Ying Zhu; Hyung-gon Mang; Qi Sun; Jun Qian; Ashley Hipps; Jian Hua
Journal:  Genetics       Date:  2012-06-19       Impact factor: 4.562

Review 3.  The discovery approaches and detection methods of microRNAs.

Authors:  Yong Huang; Quan Zou; Sheng Peng Wang; Shun Ming Tang; Guo Zheng Zhang; Xing Jia Shen
Journal:  Mol Biol Rep       Date:  2010-11-25       Impact factor: 2.316

4.  Genetic analysis and fine mapping of a rice brown planthopper (Nilaparvata lugens Stål) resistance gene bph19(t).

Authors:  J W Chen; L Wang; X F Pang; Q H Pan
Journal:  Mol Genet Genomics       Date:  2006-01-05       Impact factor: 3.291

5.  Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana.

Authors:  Alexander H J Wittenberg; Theo van der Lee; Cyril Cayla; Andrzej Kilian; Richard G F Visser; Henk J Schouten
Journal:  Mol Genet Genomics       Date:  2005-07-16       Impact factor: 3.291

Review 6.  Quantitative trait loci from identification to exploitation for crop improvement.

Authors:  Jitendra Kumar; Debjyoti Sen Gupta; Sunanda Gupta; Sonali Dubey; Priyanka Gupta; Shiv Kumar
Journal:  Plant Cell Rep       Date:  2017-03-28       Impact factor: 4.570

7.  Rapid identification of angulata leaf mutations using next-generation sequencing.

Authors:  Eduardo Mateo-Bonmatí; Rubén Casanova-Sáez; Héctor Candela; José Luis Micol
Journal:  Planta       Date:  2014-08-08       Impact factor: 4.116

8.  Arabidopsis cytokinin-resistant mutant, cnr1, displays altered auxin responses and sugar sensitivity.

Authors:  Ashverya Laxmi; Laju K Paul; Aniruddha Raychaudhuri; Janny L Peters; Jitendra P Khurana
Journal:  Plant Mol Biol       Date:  2006-08-17       Impact factor: 4.076

9.  Arabidopsis plastid AMOS1/EGY1 integrates abscisic acid signaling to regulate global gene expression response to ammonium stress.

Authors:  Baohai Li; Qing Li; Liming Xiong; Herbert J Kronzucker; Ute Krämer; Weiming Shi
Journal:  Plant Physiol       Date:  2012-10-12       Impact factor: 8.340

Review 10.  A focus on natural variation for abiotic constraints response in the model species Arabidopsis thaliana.

Authors:  Valérie Lefebvre; Seifollah Poormohammad Kiani; Mylène Durand-Tardif
Journal:  Int J Mol Sci       Date:  2009-08-13       Impact factor: 5.923

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