Literature DB >> 14557042

Alternative splicing and proteome diversity in plants: the tip of the iceberg has just emerged.

Kemal Kazan1.   

Abstract

Alternative splicing has recently emerged as one of the most significant generators of functional complexity in several relatively well-studied animal genomes, but little is known about the extent of this phenomenon in higher plants. However, recent computational and experimental studies discussed here suggest that alternative splicing probably plays a far more significant role in the generation of proteome diversity in plants than was previously thought.

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Year:  2003        PMID: 14557042     DOI: 10.1016/j.tplants.2003.09.001

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  66 in total

1.  Genomewide comparative analysis of alternative splicing in plants.

Authors:  Bing-Bing Wang; Volker Brendel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-21       Impact factor: 11.205

2.  Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation.

Authors:  Vanina Castelli; Jean-Marc Aury; Olivier Jaillon; Patrick Wincker; Christian Clepet; Manuella Menard; Corinne Cruaud; Francis Quétier; Claude Scarpelli; Vincent Schächter; Gary Temple; Michel Caboche; Jean Weissenbach; Marcel Salanoubat
Journal:  Genome Res       Date:  2004-03       Impact factor: 9.043

3.  Arabidopsis Protein Repair L-Isoaspartyl Methyltransferases: Predominant Activities at Lethal Temperatures.

Authors:  Sarah T Villa; Qilong Xu; A Bruce Downie; Steven G Clarke
Journal:  Physiol Plant       Date:  2006-12       Impact factor: 4.500

4.  Global dissection of alternative splicing in paleopolyploid soybean.

Authors:  Yanting Shen; Zhengkui Zhou; Zheng Wang; Weiyu Li; Chao Fang; Mian Wu; Yanming Ma; Tengfei Liu; Ling-An Kong; De-Liang Peng; Zhixi Tian
Journal:  Plant Cell       Date:  2014-03-28       Impact factor: 11.277

5.  The FLP proteins act as regulators of chlorophyll synthesis in response to light and plastid signals in Chlamydomonas.

Authors:  Angela Falciatore; Livia Merendino; Fredy Barneche; Mauro Ceol; Rasa Meskauskiene; Klaus Apel; Jean-David Rochaix
Journal:  Genes Dev       Date:  2005-01-01       Impact factor: 11.361

6.  Regulation of the kinase activity of the MIK GCK-like MAP4K by alternative splicing.

Authors:  Enric Castells; Pere Puigdomènech; Josep M Casacuberta
Journal:  Plant Mol Biol       Date:  2006-07       Impact factor: 4.076

7.  Evidence for alternative splicing of MADS-box transcripts in developing cotton fibre cells.

Authors:  Damien J Lightfoot; Katharine M Malone; Jeremy N Timmis; Sharon J Orford
Journal:  Mol Genet Genomics       Date:  2007-10-18       Impact factor: 3.291

8.  Molecular analyses of the rice glutamate dehydrogenase gene family and their response to nitrogen and phosphorous deprivation.

Authors:  Xuhua Qiu; Weibo Xie; Xingming Lian; Qifa Zhang
Journal:  Plant Cell Rep       Date:  2009-05-09       Impact factor: 4.570

Review 9.  Alternative splicing at the intersection of biological timing, development, and stress responses.

Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

10.  Thermoplasticity in the plant circadian clock: how plants tell the time-perature.

Authors:  Allan B James; Naeem Hasan Syed; John W S Brown; Hugh G Nimmo
Journal:  Plant Signal Behav       Date:  2012-08-20
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