Literature DB >> 14532126

Formation of facultative heterochromatin in the absence of HP1.

Nick Gilbert1, Shelagh Boyle, Heidi Sutherland, Jose de Las Heras, James Allan, Thomas Jenuwein, Wendy A Bickmore.   

Abstract

Facultative heterochromatin is a cytological manifestation of epigenetic mechanisms that regulate gene expression. Constitutive heterochromatin is marked by distinctive histone H3 methylation and the presence of HP1 proteins, but the chromatin modifications of facultative heterochromatin are less clear. We have examined histone modifications and HP1 in the facultative heterochromatin of nucleated erythrocytes and show that mouse and chicken erythrocytes have different mechanisms of heterochromatin formation. Mouse embryonic erythrocytes have abundant HP1, increased tri-methylation of H3 at K9 and loss of H3 tri-methylation at K27. In contrast, we show that HP1 proteins are lost during the differentiation of chicken erythrocytes, and that H3 tri-methylation at both K9 and K27 is reduced. This coincides with the appearance of the variant linker histone H5. HP1s are also absent from erythrocytes of Xenopus and zebrafish. Our data show that in the same cell lineage there are different mechanisms for forming facultative heterochromatin in vertebrates. To our knowledge, this is the first report of cell types that lack HP1s and that have gross changes in the levels of histone modifications.

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Year:  2003        PMID: 14532126      PMCID: PMC213774          DOI: 10.1093/emboj/cdg520

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  53 in total

1.  Histone H3 lysine 9 methylation is an epigenetic imprint of facultative heterochromatin.

Authors:  Antoine H F M Peters; Jacqueline E Mermoud; Dónal O'Carroll; Michaela Pagani; Dieter Schweizer; Neil Brockdorff; Thomas Jenuwein
Journal:  Nat Genet       Date:  2001-12-10       Impact factor: 38.330

Review 2.  Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects.

Authors:  Eric J Richards; Sarah C R Elgin
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

3.  Distinctive higher-order chromatin structure at mammalian centromeres.

Authors:  N Gilbert; J Allan
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

4.  cis-acting DNA from fission yeast centromeres mediates histone H3 methylation and recruitment of silencing factors and cohesin to an ectopic site.

Authors:  Janet F Partridge; Kristin S C Scott; Andrew J Bannister; Tony Kouzarides; Robin C Allshire
Journal:  Curr Biol       Date:  2002-10-01       Impact factor: 10.834

5.  Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9.

Authors:  Peter R Nielsen; Daniel Nietlispach; Helen R Mott; Juliana Callaghan; Andrew Bannister; Tony Kouzarides; Alexey G Murzin; Natalia V Murzina; Ernest D Laue
Journal:  Nature       Date:  2002-02-20       Impact factor: 49.962

6.  Differentially methylated forms of histone H3 show unique association patterns with inactive human X chromosomes.

Authors:  Barbara A Boggs; Peter Cheung; Edith Heard; David L Spector; A Craig Chinault; C David Allis
Journal:  Nat Genet       Date:  2001-12-10       Impact factor: 38.330

7.  Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus.

Authors:  M D Litt; M Simpson; M Gaszner; C D Allis; G Felsenfeld
Journal:  Science       Date:  2001-08-09       Impact factor: 47.728

8.  Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.

Authors:  Steven A Jacobs; Sepideh Khorasanizadeh
Journal:  Science       Date:  2002-02-21       Impact factor: 47.728

9.  Heterochromatin formation in mammalian cells: interaction between histones and HP1 proteins.

Authors:  A L Nielsen; M Oulad-Abdelghani; J A Ortiz; E Remboutsika; P Chambon; R Losson
Journal:  Mol Cell       Date:  2001-04       Impact factor: 17.970

10.  Loss of the Suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability.

Authors:  A H Peters; D O'Carroll; H Scherthan; K Mechtler; S Sauer; C Schöfer; K Weipoltshammer; M Pagani; M Lachner; A Kohlmaier; S Opravil; M Doyle; M Sibilia; T Jenuwein
Journal:  Cell       Date:  2001-11-02       Impact factor: 41.582

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  46 in total

1.  Restricted heterochromatin formation links NFATc2 repressor activity with growth promotion in pancreatic cancer.

Authors:  Sandra Baumgart; Elisabeth Glesel; Garima Singh; Nai-Ming Chen; Kristina Reutlinger; Jinsan Zhang; Daniel D Billadeau; Martin E Fernandez-Zapico; Thomas M Gress; Shiv K Singh; Volker Ellenrieder
Journal:  Gastroenterology       Date:  2011-11-10       Impact factor: 22.682

2.  Evidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei.

Authors:  Margot P Scheffer; Mikhail Eltsov; Achilleas S Frangakis
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-03       Impact factor: 11.205

Review 3.  The end adjusts the means: heterochromatin remodelling during terminal cell differentiation.

Authors:  Sergei A Grigoryev; Yaroslava A Bulynko; Evgenya Y Popova
Journal:  Chromosome Res       Date:  2006       Impact factor: 5.239

4.  Differentiation-specific association of HP1alpha and HP1beta with chromocentres is correlated with clustering of TIF1beta at these sites.

Authors:  Eva Bártová; Jirí Pacherník; Alois Kozubík; Stanislav Kozubek
Journal:  Histochem Cell Biol       Date:  2007-01-05       Impact factor: 4.304

5.  KRAB zinc-finger proteins localise to novel KAP1-containing foci that are adjacent to PML nuclear bodies.

Authors:  Stephanie Briers; Catherine Crawford; Wendy A Bickmore; Heidi G Sutherland
Journal:  J Cell Sci       Date:  2009-03-03       Impact factor: 5.285

6.  Analysis of histones in Xenopus laevis. I. A distinct index of enriched variants and modifications exists in each cell type and is remodeled during developmental transitions.

Authors:  David Shechter; Joshua J Nicklay; Raghu K Chitta; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal:  J Biol Chem       Date:  2008-10-28       Impact factor: 5.157

7.  Analysis of histones in Xenopus laevis. II. mass spectrometry reveals an index of cell type-specific modifications on H3 and H4.

Authors:  Joshua J Nicklay; David Shechter; Raghu K Chitta; Benjamin A Garcia; Jeffrey Shabanowitz; C David Allis; Donald F Hunt
Journal:  J Biol Chem       Date:  2008-10-28       Impact factor: 5.157

Review 8.  Histone modifications and nuclear architecture: a review.

Authors:  Eva Bártová; Jana Krejcí; Andrea Harnicarová; Gabriela Galiová; Stanislav Kozubek
Journal:  J Histochem Cytochem       Date:  2008-05-12       Impact factor: 2.479

9.  Chromatin condensation in terminally differentiating mouse erythroblasts does not involve special architectural proteins but depends on histone deacetylation.

Authors:  Evgenya Y Popova; Sharon Wald Krauss; Sarah A Short; Gloria Lee; Jonathan Villalobos; Joan Etzell; Mark J Koury; Paul A Ney; Joel Anne Chasis; Sergei A Grigoryev
Journal:  Chromosome Res       Date:  2009-01-27       Impact factor: 5.239

10.  Nuclear organization of centromeric domains is not perturbed by inhibition of histone deacetylases.

Authors:  Susan Gilchrist; Nick Gilbert; Paul Perry; Wendy A Bickmore
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

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