Literature DB >> 14528291

Visualization of membrane protein domains by cryo-electron microscopy of dengue virus.

Wei Zhang1, Paul R Chipman, Jeroen Corver, Peter R Johnson, Ying Zhang, Suchetana Mukhopadhyay, Timothy S Baker, James H Strauss, Michael G Rossmann, Richard J Kuhn.   

Abstract

Improved technology for reconstructing cryo-electron microscopy (cryo-EM) images has now made it possible to determine secondary structural features of membrane proteins in enveloped viruses. The structure of mature dengue virus particles was determined to a resolution of 9.5 A by cryo-EM and image reconstruction techniques, establishing the secondary structural disposition of the 180 envelope (E) and 180 membrane (M) proteins in the lipid envelope. The alpha-helical 'stem' regions of the E molecules, as well as part of the N-terminal section of the M proteins, are buried in the outer leaflet of the viral membrane. The 'anchor' regions of E and the M proteins each form antiparallel E-E and M-M transmembrane alpha-helices, leaving their C termini on the exterior of the viral membrane, consistent with the predicted topology of the unprocessed polyprotein. This is one of only a few determinations of the disposition of transmembrane proteins in situ and shows that the nucleocapsid core and envelope proteins do not have a direct interaction in the mature virus.

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Year:  2003        PMID: 14528291      PMCID: PMC4148076          DOI: 10.1038/nsb990

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  35 in total

1.  Mapping of functional elements in the stem-anchor region of tick-borne encephalitis virus envelope protein E.

Authors:  S L Allison; K Stiasny; K Stadler; C W Mandl; F X Heinz
Journal:  J Virol       Date:  1999-07       Impact factor: 5.103

2.  The PSIPRED protein structure prediction server.

Authors:  L J McGuffin; K Bryson; D T Jones
Journal:  Bioinformatics       Date:  2000-04       Impact factor: 6.937

3.  Identification of neutralizing epitopes within structural domain III of the West Nile virus envelope protein.

Authors:  David W C Beasley; Alan D T Barrett
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

4.  Combining electron microscopic with x-ray crystallographic structures.

Authors:  M G Rossmann; R Bernal; S V Pletnev
Journal:  J Struct Biol       Date:  2001-12       Impact factor: 2.867

5.  Structures of immature flavivirus particles.

Authors:  Ying Zhang; Jeroen Corver; Paul R Chipman; Wei Zhang; Sergei V Pletnev; Dagmar Sedlak; Timothy S Baker; James H Strauss; Richard J Kuhn; Michael G Rossmann
Journal:  EMBO J       Date:  2003-06-02       Impact factor: 11.598

6.  Structural requirements for low-pH-induced rearrangements in the envelope glycoprotein of tick-borne encephalitis virus.

Authors:  K Stiasny; S L Allison; A Marchler-Bauer; C Kunz; F X Heinz
Journal:  J Virol       Date:  1996-11       Impact factor: 5.103

7.  Nucleotide sequence of dengue 2 RNA and comparison of the encoded proteins with those of other flaviviruses.

Authors:  Y S Hahn; R Galler; T Hunkapiller; J M Dalrymple; J H Strauss; E G Strauss
Journal:  Virology       Date:  1988-01       Impact factor: 3.616

8.  The Fusion glycoprotein shell of Semliki Forest virus: an icosahedral assembly primed for fusogenic activation at endosomal pH.

Authors:  J Lescar; A Roussel; M W Wien; J Navaza; S D Fuller; G Wengler; G Wengler; F A Rey
Journal:  Cell       Date:  2001-04-06       Impact factor: 41.582

9.  Synthesis of proteins and glycoproteins in dengue type 2 virus-infected vero and Aedes albopictus cells.

Authors:  G W Smith; P J Wright
Journal:  J Gen Virol       Date:  1985-03       Impact factor: 3.891

10.  Antibodies to dengue 2 virus E-glycoprotein synthetic peptides identify antigenic conformation.

Authors:  J T Roehrig; A J Johnson; A R Hunt; R A Bolin; M C Chu
Journal:  Virology       Date:  1990-08       Impact factor: 3.616

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  189 in total

Review 1.  Virus maturation.

Authors:  David Veesler; John E Johnson
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

2.  Conformational changes of the flavivirus E glycoprotein.

Authors:  Ying Zhang; Wei Zhang; Steven Ogata; David Clements; James H Strauss; Timothy S Baker; Richard J Kuhn; Michael G Rossmann
Journal:  Structure       Date:  2004-09       Impact factor: 5.006

3.  Structure of the multidrug resistance efflux transporter EmrE from Escherichia coli.

Authors:  Che Ma; Geoffrey Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-17       Impact factor: 11.205

4.  Immunodominance and functional activities of antibody responses to inactivated West Nile virus and recombinant subunit vaccines in mice.

Authors:  Juergen Zlatkovic; Karin Stiasny; Franz X Heinz
Journal:  J Virol       Date:  2010-12-08       Impact factor: 5.103

5.  Molecular characterization of DENV-3 circulating during the post-monsoon period of 2013-14 in Delhi, India.

Authors:  Pankaj Sharma; Veena Mittal; Mala Chhabra; Roop Kumari; Priyanka Singh; Dipesh Bhattacharya; Srinivas Venkatesh; Arvind Rai
Journal:  Virol Sin       Date:  2015-12       Impact factor: 4.327

6.  Crystal structure of west nile virus envelope glycoprotein reveals viral surface epitopes.

Authors:  Ryuta Kanai; Kalipada Kar; Karen Anthony; L Hannah Gould; Michel Ledizet; Erol Fikrig; Wayne A Marasco; Raymond A Koski; Yorgo Modis
Journal:  J Virol       Date:  2006-08-30       Impact factor: 5.103

7.  The stem region of premembrane protein plays an important role in the virus surface protein rearrangement during dengue maturation.

Authors:  Qian Zhang; Cornelia Hunke; Yin Hoe Yau; Vernon Seow; Sumarlin Lee; Lukas Bahati Tanner; Xue Li Guan; Markus R Wenk; Guntur Fibriansah; Pau Ling Chew; Petra Kukkaro; Goran Biukovic; Pei-Yong Shi; Susana Geifman Shochat; Gerhard Grüber; Shee-Mei Lok
Journal:  J Biol Chem       Date:  2012-10-03       Impact factor: 5.157

8.  Construction and characterization of a single-cycle chimeric flavivirus vaccine candidate that protects mice against lethal challenge with dengue virus type 2.

Authors:  Ryosuke Suzuki; Evandro R Winkelmann; Peter W Mason
Journal:  J Virol       Date:  2008-12-10       Impact factor: 5.103

9.  Characterization of dengue virus complex-specific neutralizing epitopes on envelope protein domain III of dengue 2 virus.

Authors:  Gregory D Gromowski; Nicholas D Barrett; Alan D T Barrett
Journal:  J Virol       Date:  2008-06-18       Impact factor: 5.103

10.  Isolation of capsid protein dimers from the tick-borne encephalitis flavivirus and in vitro assembly of capsid-like particles.

Authors:  Stefan Kiermayr; Regina M Kofler; Christian W Mandl; Paul Messner; Franz X Heinz
Journal:  J Virol       Date:  2004-08       Impact factor: 5.103

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