Literature DB >> 14526001

Production of high-quality particulate methane monooxygenase in high yields from Methylococcus capsulatus (bath) with a hollow-fiber membrane bioreactor.

Steve S-F Yu1, Kelvin H-C Chen, Mandy Y-H Tseng, Yane-Shih Wang, Chiu-Feng Tseng, Yu-Ju Chen, Ded-Shih Huang, Sunney I Chan.   

Abstract

In order to obtain particulate methane monooxygenase (pMMO)-enriched membranes from Methylococcus capsulatus (Bath) with high activity and in high yields, we devised a method to process cell growth in a fermentor adapted with a hollow-fiber bioreactor that allows easy control and quantitative adjustment of the copper ion concentration in NMS medium over the time course of cell culture. This technical improvement in the method for culturing bacterial cells allowed us to study the effects of copper ion concentration in the growth medium on the copper content in the membranes, as well as the specific activity of the enzyme. The optimal copper concentration in the growth medium was found to be 30 to 35 micro M. Under these conditions, the pMMO is highly expressed, accounting for 80% of the total cytoplasmic membrane proteins and having a specific activity as high as 88.9 nmol of propylene oxide/min/mg of protein with NADH as the reductant. The copper stoichiometry is approximately 13 atoms per pMMO molecule. Analysis of other metal contents provided no evidence of zinc, and only traces of iron were present in the pMMO-enriched membranes. Further purification by membrane solubilization in dodecyl beta-D-maltoside followed by fractionation of the protein-detergent complexes according to molecular size by gel filtration chromatography resulted in a good yield of the pMMO-detergent complex and a high level of homogeneity. The pMMO-detergent complex isolated in this way had a molecular mass of 220 kDa and consisted of an alphabetagamma protein monomer encapsulated in a micelle consisting of ca. 240 detergent molecules. The enzyme is a copper protein containing 13.6 mol of copper/mol of pMMO and essentially no iron (ratio of copper to iron, 80:1). Both the detergent-solubilized membranes and the purified pMMO-detergent complex exhibited reasonable, if not excellent, specific activity. Finally, our ability to control the level of expression of the pMMO allowed us to clarify the sensitivity of the enzyme to NADH and duroquinol, the two common reductants used to assay the enzyme.

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Year:  2003        PMID: 14526001      PMCID: PMC225036          DOI: 10.1128/JB.185.20.5915-5924.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  15 in total

1.  Effect of copper speciation on whole-cell soluble methane monooxygenase activity in Methylosinus trichosporium OB3b.

Authors:  J D Morton; K F Hayes; J D Semrau
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

2.  The membrane-associated form of methane mono-oxygenase from Methylococcus capsulatus (Bath) is a copper/iron protein.

Authors:  Piku Basu; Bettina Katterle; K Kristoffer Andersson; Howard Dalton
Journal:  Biochem J       Date:  2003-01-15       Impact factor: 3.857

Review 3.  Transition metal speciation in the cell: insights from the chemistry of metal ion receptors.

Authors:  Lydia A Finney; Thomas V O'Halloran
Journal:  Science       Date:  2003-05-09       Impact factor: 47.728

4.  Protein measurement with the Folin phenol reagent.

Authors:  O H LOWRY; N J ROSEBROUGH; A L FARR; R J RANDALL
Journal:  J Biol Chem       Date:  1951-11       Impact factor: 5.157

5.  Particulate methane monooxygenase genes in methanotrophs.

Authors:  J D Semrau; A Chistoserdov; J Lebron; A Costello; J Davagnino; E Kenna; A J Holmes; R Finch; J C Murrell; M E Lidstrom
Journal:  J Bacteriol       Date:  1995-06       Impact factor: 3.490

6.  Detergent solubilization of membrane-bound methane monooxygenase requires plastoquinol analogs as electron donors.

Authors:  A K Shiemke; S A Cook; T Miley; P Singleton
Journal:  Arch Biochem Biophys       Date:  1995-08-20       Impact factor: 4.013

7.  The nature of the copper ions in the membranes containing the particulate methane monooxygenase from Methylococcus capsulatus (Bath).

Authors:  H H Nguyen; A K Shiemke; S J Jacobs; B J Hales; M E Lidstrom; S I Chan
Journal:  J Biol Chem       Date:  1994-05-27       Impact factor: 5.157

Review 8.  Physiology, biochemistry, and specific inhibitors of CH4, NH4+, and CO oxidation by methanotrophs and nitrifiers.

Authors:  C Bédard; R Knowles
Journal:  Microbiol Rev       Date:  1989-03

9.  Particulate methane monooxygenase from Methylosinus trichosporium is a copper-containing enzyme.

Authors:  Jia-Ying Xin; Jun-Ru Cui; Xiao-Xue Hu; Shu-Ben Li; Chun-Gu Xia; Li-Min Zhu; Yi-Qun Wang
Journal:  Biochem Biophys Res Commun       Date:  2002-07-05       Impact factor: 3.575

10.  Purified particulate methane monooxygenase from Methylococcus capsulatus (Bath) is a dimer with both mononuclear copper and a copper-containing cluster.

Authors:  Raquel L Lieberman; Deepak B Shrestha; Peter E Doan; Brian M Hoffman; Timothy L Stemmler; Amy C Rosenzweig
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-12       Impact factor: 11.205

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  12 in total

1.  Crystal structure and characterization of particulate methane monooxygenase from Methylocystis species strain M.

Authors:  Stephen M Smith; Swati Rawat; Joshua Telser; Brian M Hoffman; Timothy L Stemmler; Amy C Rosenzweig
Journal:  Biochemistry       Date:  2011-11-03       Impact factor: 3.162

2.  Metal reconstitution of particulate methane monooxygenase and heterologous expression of the pmoB subunit.

Authors:  Stephen M Smith; Ramakrishnan Balasubramanian; Amy C Rosenzweig
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

3.  Oxidation of methane by a biological dicopper centre.

Authors:  Ramakrishnan Balasubramanian; Stephen M Smith; Swati Rawat; Liliya A Yatsunyk; Timothy L Stemmler; Amy C Rosenzweig
Journal:  Nature       Date:  2010-04-21       Impact factor: 49.962

Review 4.  Methane-Oxidizing Enzymes: An Upstream Problem in Biological Gas-to-Liquids Conversion.

Authors:  Thomas J Lawton; Amy C Rosenzweig
Journal:  J Am Chem Soc       Date:  2016-07-19       Impact factor: 15.419

5.  Inhibition of membrane-bound methane monooxygenase and ammonia monooxygenase by diphenyliodonium: implications for electron transfer.

Authors:  Andrew K Shiemke; Daniel J Arp; Luis A Sayavedra-Soto
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

6.  The metal centers of particulate methane monooxygenase from Methylosinus trichosporium OB3b.

Authors:  Amanda S Hakemian; Kalyan C Kondapalli; Joshua Telser; Brian M Hoffman; Timothy L Stemmler; Amy C Rosenzweig
Journal:  Biochemistry       Date:  2008-06-10       Impact factor: 3.162

Review 7.  The metal centres of particulate methane mono-oxygenase.

Authors:  Amy C Rosenzweig
Journal:  Biochem Soc Trans       Date:  2008-12       Impact factor: 5.407

Review 8.  A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea.

Authors:  Ludmila Chistoserdova; Julia A Vorholt; Mary E Lidstrom
Journal:  Genome Biol       Date:  2005-02-01       Impact factor: 13.583

9.  Printable enzyme-embedded materials for methane to methanol conversion.

Authors:  Craig D Blanchette; Jennifer M Knipe; Joshuah K Stolaroff; Joshua R DeOtte; James S Oakdale; Amitesh Maiti; Jeremy M Lenhardt; Sarah Sirajuddin; Amy C Rosenzweig; Sarah E Baker
Journal:  Nat Commun       Date:  2016-06-15       Impact factor: 14.919

10.  Evidence for the role of zinc on the performance of dibenzothiophene desulfurization by Gordonia alkanivorans strain 1B.

Authors:  Luís Alves; José Matos; Rogério Tenreiro; Francisco M Gírio
Journal:  J Ind Microbiol Biotechnol       Date:  2007-11-28       Impact factor: 4.258

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