Literature DB >> 14504219

Post-transcriptional cosuppression of Ty1 retrotransposition.

David J Garfinkel1, Katherine Nyswaner, Jun Wang, Jae-Yong Cho.   

Abstract

To determine whether homology-dependent gene silencing or cosuppression mechanisms underlie copy number control (CNC) of Ty1 retrotransposition, we introduced an active Ty1 element into a naïve strain. Single Ty1 element retrotransposition was elevated in a Ty1-less background, but decreased dramatically when additional elements were present. Transcription from the suppressing Ty1 elements enhanced CNC but translation or reverse transcription was not required. Ty1 CNC occurred with a transcriptionally active Ty2 element, but not with Ty3 or Ty5 elements. CNC also occurred when the suppressing Ty1 elements were transcriptionally silenced, fused to the constitutive PGK1 promoter, or contained a minimal segment of mostly TYA1-gag sequence. Ty1 transcription of a multicopy element expressed from the GAL1 promoter abolished CNC, even when the suppressing element was defective for transposition. Although Ty1 RNA and TyA1-gag protein levels increased with the copy number of expressible elements, a given element's transcript level varied less than twofold regardless of whether the suppressing elements were transcriptionally active or repressed. Furthermore, a decrease in the synthesis of Ty1 cDNA is strongly associated with Ty1 CNC. Together our results suggest that Ty1 cosuppression can occur post-transcriptionally, either prior to or during reverse transcription.

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Year:  2003        PMID: 14504219      PMCID: PMC1462740     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  55 in total

1.  Retrotransposons as epigenetic mediators of phenotypic variation in mammals.

Authors:  E Whitelaw; D I Martin
Journal:  Nat Genet       Date:  2001-04       Impact factor: 38.330

2.  The Saccharomyces cerevisiae DNA recombination and repair functions of the RAD52 epistasis group inhibit Ty1 transposition.

Authors:  A J Rattray; B K Shafer; D J Garfinkel
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

Review 3.  The genetics of RNA silencing.

Authors:  Marcel Tijsterman; Rene F Ketting; Ronald H A Plasterk
Journal:  Annu Rev Genet       Date:  2002-06-11       Impact factor: 16.830

4.  Efficient homologous recombination of Ty1 element cDNA when integration is blocked.

Authors:  G Sharon; T J Burkett; D J Garfinkel
Journal:  Mol Cell Biol       Date:  1994-10       Impact factor: 4.272

5.  Posttranslational inhibition of Ty1 retrotransposition by nucleotide excision repair/transcription factor TFIIH subunits Ssl2p and Rad3p.

Authors:  B S Lee; C P Lichtenstein; B Faiola; L A Rinckel; W Wysock; M J Curcio; D J Garfinkel
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

Review 6.  Nonsense-mediated mRNA decay in Saccharomyces cerevisiae.

Authors:  C I González; A Bhattacharya; W Wang; S W Peltz
Journal:  Gene       Date:  2001-08-22       Impact factor: 3.688

Review 7.  The population biology and evolutionary significance of Ty elements in Saccharomyces cerevisiae.

Authors:  C M Wilke; E Maimer; J Adams
Journal:  Genetica       Date:  1992       Impact factor: 1.082

8.  Retrotransposon reverse-transcriptase-mediated repair of chromosomal breaks.

Authors:  S C Teng; B Kim; A Gabriel
Journal:  Nature       Date:  1996-10-17       Impact factor: 49.962

9.  Transpositional competence and transcription of endogenous Ty elements in Saccharomyces cerevisiae: implications for regulation of transposition.

Authors:  M J Curcio; N J Sanders; D J Garfinkel
Journal:  Mol Cell Biol       Date:  1988-09       Impact factor: 4.272

10.  Copy number control of a transposable element, the I factor, a LINE-like element in Drosophila.

Authors:  M C Chaboissier; A Bucheton; D J Finnegan
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

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  41 in total

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Authors:  David J Garfinkel; Katherine M Nyswaner; Karen M Stefanisko; Caroline Chang; Sharon P Moore
Journal:  Genetics       Date:  2005-01-31       Impact factor: 4.562

2.  Retrotransposon suicide: formation of Ty1 circles and autointegration via a central DNA flap.

Authors:  David J Garfinkel; Karen M Stefanisko; Katherine M Nyswaner; Sharon P Moore; Jangsuk Oh; Stephen H Hughes
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

Review 3.  Host factors that control long terminal repeat retrotransposons in Saccharomyces cerevisiae: implications for regulation of mammalian retroviruses.

Authors:  Patrick H Maxwell; M Joan Curcio
Journal:  Eukaryot Cell       Date:  2007-05-11

4.  Hos2 and Set3 promote integration of Ty1 retrotransposons at tRNA genes in Saccharomyces cerevisiae.

Authors:  Zhongming Mou; Alison E Kenny; M Joan Curcio
Journal:  Genetics       Date:  2006-01-16       Impact factor: 4.562

Review 5.  The challenges of predicting transposable element activity in hybrids.

Authors:  Mathieu Hénault
Journal:  Curr Genet       Date:  2021-03-18       Impact factor: 3.886

Review 6.  Border collies of the genome: domestication of an autonomous retrovirus-like transposon.

Authors:  M Joan Curcio
Journal:  Curr Genet       Date:  2018-06-21       Impact factor: 3.886

7.  P-body components are required for Ty1 retrotransposition during assembly of retrotransposition-competent virus-like particles.

Authors:  Mary Ann Checkley; Kunio Nagashima; Stephen J Lockett; Katherine M Nyswaner; David J Garfinkel
Journal:  Mol Cell Biol       Date:  2009-11-09       Impact factor: 4.272

8.  The effect of hybridization on transposable element accumulation in an undomesticated fungal species.

Authors:  Mathieu Hénault; Souhir Marsit; Guillaume Charron; Christian R Landry
Journal:  Elife       Date:  2020-09-21       Impact factor: 8.140

9.  Chromatin-associated genes protect the yeast genome from Ty1 insertional mutagenesis.

Authors:  Katherine M Nyswaner; Mary Ann Checkley; Ming Yi; Robert M Stephens; David J Garfinkel
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

Review 10.  A self-encoded capsid derivative restricts Ty1 retrotransposition in Saccharomyces.

Authors:  David J Garfinkel; Jessica M Tucker; Agniva Saha; Yuri Nishida; Katarzyna Pachulska-Wieczorek; Leszek Błaszczyk; Katarzyna J Purzycka
Journal:  Curr Genet       Date:  2015-12-09       Impact factor: 3.886

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