Literature DB >> 14501067

High-throughput TILLING for functional genomics.

Bradley J Till1, Trenton Colbert, Rachel Tompa, Linda C Enns, Christine A Codomo, Jessica E Johnson, Steven H Reynolds, Jorja G Henikoff, Elizabeth A Greene, Michael N Steine, Luca Comai, Steven Henikoff.   

Abstract

Targeting-induced local lesions in genomes (TILLING) is a general strategy for identifying induced point mutations that can be applied to almost any organism. Here, we describe the basic methodology for high-throughput TILLING. Gene segments are amplified using fluorescently tagged primers, and products are denatured and reannealed to form heteroduplexes between the mutated sequence and its wild-type counterpart. These heteroduplexes are substrates for cleavage by the endonuclease CEL I. Following cleavage, products are analyzed on denaturing polyacrylamide gels using the LI-COR DNA analyzer system. High-throughput TILLING has been adopted by the Arabidopsis TILLING Project (ATP) to provide allelic series of point mutations for the general Arabidopsis community.

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Year:  2003        PMID: 14501067     DOI: 10.1385/1-59259-413-1:205

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  40 in total

1.  Large-scale discovery of induced point mutations with high-throughput TILLING.

Authors:  Bradley J Till; Steven H Reynolds; Elizabeth A Greene; Christine A Codomo; Linda C Enns; Jessica E Johnson; Chris Burtner; Anthony R Odden; Kim Young; Nicholas E Taylor; Jorja G Henikoff; Luca Comai; Steven Henikoff
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

2.  Mismatch cleavage by single-strand specific nucleases.

Authors:  Bradley J Till; Chris Burtner; Luca Comai; Steven Henikoff
Journal:  Nucleic Acids Res       Date:  2004-05-11       Impact factor: 16.971

Review 3.  Reverse genetics in eukaryotes.

Authors:  Serge Hardy; Vincent Legagneux; Yann Audic; Luc Paillard
Journal:  Biol Cell       Date:  2010-10       Impact factor: 4.458

4.  ARABIDOPSIS CRINKLY4 function, internalization, and turnover are dependent on the extracellular crinkly repeat domain.

Authors:  Miriam L Gifford; Fiona C Robertson; Dinesh C Soares; Gwyneth C Ingram
Journal:  Plant Cell       Date:  2005-03-16       Impact factor: 11.277

Review 5.  Learning from small fry: the zebrafish as a genetic model organism for aquaculture fish species.

Authors:  Ralf Dahm; Robert Geisler
Journal:  Mar Biotechnol (NY)       Date:  2006-04-25       Impact factor: 3.619

6.  Mutational Analysis of the Chlamydia muridarum Plasticity Zone.

Authors:  Krithika Rajaram; Amanda M Giebel; Evelyn Toh; Shuai Hu; Jasmine H Newman; Sandra G Morrison; Laszlo Kari; Richard P Morrison; David E Nelson
Journal:  Infect Immun       Date:  2015-05-04       Impact factor: 3.441

7.  Retention of induced mutations in a Drosophila reverse-genetic resource.

Authors:  Jennifer L Cooper; Elizabeth A Greene; Bradley J Till; Christine A Codomo; Barbara T Wakimoto; Steven Henikoff
Journal:  Genetics       Date:  2008-09-09       Impact factor: 4.562

Review 8.  Mutagenesis and beyond! Tools for understanding legume biology.

Authors:  Million Tadege; Trevor L Wang; Jiangqi Wen; Pascal Ratet; Kirankumar S Mysore
Journal:  Plant Physiol       Date:  2009-09-09       Impact factor: 8.340

9.  High-resolution genetic mapping and candidate gene identification of the SLP1 locus that controls glume development in rice.

Authors:  Sheng-Shan Wang; Chang-Sheng Wang; Tung-Hai Tseng; Ya-Lin Hou; Kai-Yi Chen
Journal:  Theor Appl Genet       Date:  2011-02-17       Impact factor: 5.699

10.  Efficient and fast targeted production of murine models based on ENU mutagenesis.

Authors:  M Augustin; R Sedlmeier; T Peters; U Huffstadt; E Kochmann; D Simon; M Schöniger; S Garke-Mayerthaler; J Laufs; M Mayhaus; S Franke; M Klose; A Graupner; M Kurzmann; C Zinser; A Wolf; M Voelkel; M Kellner; M Kilian; S Seelig; A Koppius; A Teubner; D Korthaus; M Nehls; S Wattler
Journal:  Mamm Genome       Date:  2005-06       Impact factor: 2.957

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