Literature DB >> 14500883

The physical basis of microtubule structure and stability.

David Sept1, Nathan A Baker, J Andrew McCammon.   

Abstract

Microtubules are cylindrical polymers found in every eukaryotic cell. They have a unique helical structure that has implications at both the cellular level, in terms of the functions they perform, and at the multicellular level, such as determining the left-right symmetry in plants. Through the combination of an atomically detailed model for a microtubule and large-scale computational techniques for computing electrostatic interactions, we are able to explain the observed microtubule structure. On the basis of the lateral interactions between protofilaments, we have determined that B lattice is the most favorable configuration. Further, we find that these lateral bonds are significantly weaker than the longitudinal bonds along protofilaments. This explains observations of microtubule disassembly and may serve as another step toward understanding the basis for dynamic instability.

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Year:  2003        PMID: 14500883      PMCID: PMC2366909          DOI: 10.1110/ps.03187503

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  14 in total

1.  Microtubules switch occasionally into unfavorable configurations during elongation.

Authors:  D Chrétien; S D Fuller
Journal:  J Mol Biol       Date:  2000-05-12       Impact factor: 5.469

2.  Refined structure of alpha beta-tubulin at 3.5 A resolution.

Authors:  J Löwe; H Li; K H Downing; E Nogales
Journal:  J Mol Biol       Date:  2001-11-09       Impact factor: 5.469

3.  Microtubule structure at improved resolution.

Authors:  P Meurer-Grob; J Kasparian; R H Wade
Journal:  Biochemistry       Date:  2001-07-10       Impact factor: 3.162

4.  Thermodynamics and kinetics of actin filament nucleation.

Authors:  D Sept; J A McCammon
Journal:  Biophys J       Date:  2001-08       Impact factor: 4.033

5.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

6.  High-resolution model of the microtubule.

Authors:  E Nogales; M Whittaker; R A Milligan; K H Downing
Journal:  Cell       Date:  1999-01-08       Impact factor: 41.582

7.  Structure of the alpha beta tubulin dimer by electron crystallography.

Authors:  E Nogales; S G Wolf; K H Downing
Journal:  Nature       Date:  1998-01-08       Impact factor: 49.962

8.  Recombinant kinesin motor domain binds to beta-tubulin and decorates microtubules with a B surface lattice.

Authors:  Y H Song; E Mandelkow
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-01       Impact factor: 11.205

9.  Dynamic instability of microtubule growth.

Authors:  T Mitchison; M Kirschner
Journal:  Nature       Date:  1984 Nov 15-21       Impact factor: 49.962

10.  Direct visualization of the microtubule lattice seam both in vitro and in vivo.

Authors:  M Kikkawa; T Ishikawa; T Nakata; T Wakabayashi; N Hirokawa
Journal:  J Cell Biol       Date:  1994-12       Impact factor: 10.539

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  52 in total

1.  Anomalous flexural behaviors of microtubules.

Authors:  Xiaojing Liu; Youhe Zhou; Huajian Gao; Jizeng Wang
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

2.  Mechanical properties of a complete microtubule revealed through molecular dynamics simulation.

Authors:  David B Wells; Aleksei Aksimentiev
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

3.  Anisotropic elastic network modeling of entire microtubules.

Authors:  Marco A Deriu; Monica Soncini; Mario Orsi; Mishal Patel; Jonathan W Essex; Franco M Montevecchi; Alberto Redaelli
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

4.  Electrostatic correlations and fluctuations for ion binding to a finite length polyelectrolyte.

Authors:  Zhi-Jie Tan; Shi-Jie Chen
Journal:  J Chem Phys       Date:  2005-01-22       Impact factor: 3.488

5.  A molecular-mechanical model of the microtubule.

Authors:  Maxim I Molodtsov; Elena A Ermakova; Emmanuil E Shnol; Ekaterina L Grishchuk; J Richard McIntosh; Fazly I Ataullakhanov
Journal:  Biophys J       Date:  2005-02-18       Impact factor: 4.033

6.  Anisotropic elastic properties of microtubules.

Authors:  J A Tuszyński; T Luchko; S Portet; J M Dixon
Journal:  Eur Phys J E Soft Matter       Date:  2005-04-06       Impact factor: 1.890

7.  Elastic vibrations in seamless microtubules.

Authors:  S Portet; J A Tuszyński; C W V Hogue; J M Dixon
Journal:  Eur Biophys J       Date:  2005-05-11       Impact factor: 1.733

8.  Radial compression of microtubules and the mechanism of action of taxol and associated proteins.

Authors:  Daniel J Needleman; Miguel A Ojeda-Lopez; Uri Raviv; Kai Ewert; Herbert P Miller; Leslie Wilson; Cyrus R Safinya
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

9.  Microtubules: mechanical meets chemical.

Authors:  Henry T Schek; Alan J Hunt
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

10.  Oxidative species-induced excitonic transport in tubulin aromatic networks: Potential implications for neurodegenerative disease.

Authors:  P Kurian; T O Obisesan; T J A Craddock
Journal:  J Photochem Photobiol B       Date:  2017-08-24       Impact factor: 6.252

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