Literature DB >> 1446346

The attachments of chromatin loops to the nucleoskeleton.

D A Jackson1, A Dolle, G Robertson, P R Cook.   

Abstract

It is widely assumed by cell biologists that chromatin is looped by attachment to some nuclear skeleton. 'Structural' attachments might be mediated through specific sequences; these would be attached in most cells in an organism, underlying the basic structure of the mitotic chromosome and persisting throughout interphase. 'Functional' attachments might also exist, perhaps if active polymerases are attached to the skeleton and replication and transcription occur as DNA is reeled through them. Cells of different tissues--and even cells of the same tissue--would have different attachments of this type. Problems associated with demonstrating these two kinds of attachment are discussed. We find little good evidence for 'structural' attachments and explore the idea that 'functional' attachments are the only kind that exist: 'functional' attachments involving active transcription units might be stable enough to organize chromatin during both interphase and mitosis, but 'dynamic' enough to allow duplication of attached sequences without disrupting loops.

Mesh:

Substances:

Year:  1992        PMID: 1446346     DOI: 10.1016/s0309-1651(05)80013-x

Source DB:  PubMed          Journal:  Cell Biol Int Rep        ISSN: 0309-1651


  17 in total

1.  SATB1 cleavage by caspase 6 disrupts PDZ domain-mediated dimerization, causing detachment from chromatin early in T-cell apoptosis.

Authors:  S Galande; L A Dickinson; I S Mian; M Sikorska; T Kohwi-Shigematsu
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

2.  Chromosome topology-organizing genes by loops and bounds

Authors: 
Journal:  Plant Cell       Date:  1998-08       Impact factor: 11.277

3.  Excision of chromosomal DNA loops by treatment of permeabilised cells with Bal 31 nuclease.

Authors:  M A Lagarkova; O V Iarovaia; S V Razin
Journal:  Mol Gen Genet       Date:  1995-11-15

4.  Comparison of Nuclear Matrix and Mitotic Chromosome Scaffold Proteins in Drosophila S2 Cells-Transmission of Hallmarks of Nuclear Organization Through Mitosis.

Authors:  Rahul Sureka; Rashi Wadhwa; Suman S Thakur; Rashmi U Pathak; Rakesh K Mishra
Journal:  Mol Cell Proteomics       Date:  2018-07-10       Impact factor: 5.911

5.  The effect of sodium tetrathionate stabilization on the distribution of three nuclear matrix proteins in human K562 erythroleukemia cells.

Authors:  L M Neri; B M Riederer; R A Marugg; S Capitani; A M Martelli
Journal:  Histochem Cell Biol       Date:  1995-07       Impact factor: 4.304

6.  High salt- and SDS-stable DNA binding protein complexes with ATPase and protein kinase activity retained in chromatin-depleted nuclei.

Authors:  B Juodka; E Spiess; A Angiolillo; G Joswig; K Rothbarth; D Werner
Journal:  Nucleic Acids Res       Date:  1995-04-25       Impact factor: 16.971

7.  Construction of a chromosome specific library of human MARs and mapping of matrix attachment regions on human chromosome 19.

Authors:  L G Nikolaev; T Tsevegiyn; S B Akopov; L K Ashworth; E D Sverdlov
Journal:  Nucleic Acids Res       Date:  1996-04-01       Impact factor: 16.971

8.  Sequences attaching loops of nuclear and mitochondrial DNA to underlying structures in human cells: the role of transcription units.

Authors:  D A Jackson; J Bartlett; P R Cook
Journal:  Nucleic Acids Res       Date:  1996-04-01       Impact factor: 16.971

9.  The human growth hormone locus control region mediates long-distance transcriptional activation independent of nuclear matrix attachment regions.

Authors:  B M Shewchuk; N E Cooke; S A Liebhaber
Journal:  Nucleic Acids Res       Date:  2001-08-15       Impact factor: 16.971

10.  Mapping of genomic DNA loop organization in a 500-kilobase region of the Drosophila X chromosome by the topoisomerase II-mediated DNA loop excision protocol.

Authors:  O Iarovaia; R Hancock; M Lagarkova; R Miassod; S V Razin
Journal:  Mol Cell Biol       Date:  1996-01       Impact factor: 4.272

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.