Literature DB >> 1445923

Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.

D Kohda1, F Inagaki.   

Abstract

The three-dimensional structures of epidermal growth factors (EGF) previously reported were all in acidic solutions (pH 2.0-3.2), at which pHs EGF cannot bind to the receptor. Here we studied the structure of mouse EGF at pH 6.8, where EGF is physiologically active, and compared it with the structure at pH 2.0 by CD and NMR. From pH dependence of CD spectra and a comparison between the chemical shifts of the proton resonances at pH 6.8 and 2.0, the conformations at two pHs were found to be nearly identical except for the C-terminal tail region. The three-dimensional structures at pH 6.8 and 2.0 were determined independently by a combination of two-dimensional 1H NMR and stimulated annealing calculations using the program XPLOR. The calculations were based on 261 distance constraints at pH 6.8 and 355 distance and 24 torsion angle constraints at pH 2.0. The conformational difference of the C-terminal domain (residues 33-50) was detected between the two structures, which were supported by CD and the chemical shift comparison. The positions of the side chains of Leu47, Arg48, Trp49, and Trp50 are changed probably by the effect of the deprotonation of Asp46. Considering the fact that Leu47 is essential in EGF binding to the receptor, this conformational difference may be important in receptor recognition.

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Year:  1992        PMID: 1445923     DOI: 10.1021/bi00162a036

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

Review 1.  Overview of protein structural and functional folds.

Authors:  Peter D Sun; Christine E Foster; Jeffrey C Boyington
Journal:  Curr Protoc Protein Sci       Date:  2004-05

2.  Determinants of the factor IX mutational spectrum in haemophilia B: an analysis of missense mutations using a multi-domain molecular model of the activated protein.

Authors:  A I Wacey; M Krawczak; V V Kakkar; D N Cooper
Journal:  Hum Genet       Date:  1994-12       Impact factor: 4.132

3.  Structure-function studies of mEGF: probing the type I beta-turn between residues 25 and 26.

Authors:  C C Lester; B Wang; R Wu; H A Scheraga
Journal:  J Protein Chem       Date:  1995-11

4.  Role of the 6-20 disulfide bridge in the structure and activity of epidermal growth factor.

Authors:  K J Barnham; A M Torres; D Alewood; P F Alewood; T Domagala; E C Nice; R S Norton
Journal:  Protein Sci       Date:  1998-08       Impact factor: 6.725

5.  Characterization of a comparative model of the extracellular domain of the epidermal growth factor receptor.

Authors:  R N Jorissen; V C Epa; H R Treutlein; T P Garrett; C W Ward; A W Burgess
Journal:  Protein Sci       Date:  2000-02       Impact factor: 6.725

6.  Protein- and metal-dependent interactions of a prominent protein in mussel adhesive plaques.

Authors:  Dong Soo Hwang; Hongbo Zeng; Admir Masic; Matthew J Harrington; Jacob N Israelachvili; J Herbert Waite
Journal:  J Biol Chem       Date:  2010-06-21       Impact factor: 5.157

7.  Combined use of 13C chemical shift and 1H alpha-13C alpha heteronuclear NOE data in monitoring a protein NMR structure refinement.

Authors:  B Celda; C Biamonti; M J Arnau; R Tejero; G T Montelione
Journal:  J Biomol NMR       Date:  1995-02       Impact factor: 2.835

8.  Molecular basis for the recognition and cleavages of IGF-II, TGF-alpha, and amylin by human insulin-degrading enzyme.

Authors:  Qing Guo; Marika Manolopoulou; Yao Bian; Alexander B Schilling; Wei-Jen Tang
Journal:  J Mol Biol       Date:  2009-11-05       Impact factor: 5.469

9.  The kinetics of the hydrogen/deuterium exchange of epidermal growth factor receptor ligands.

Authors:  Ibon Iloro; Daniel Narváez; Nancy Guillén; Carlos M Camacho; Lalisse Guillén; Elsa Cora; Belinda Pastrana-Ríos
Journal:  Biophys J       Date:  2008-01-16       Impact factor: 4.033

10.  Interactions among the epidermal growth factor-like modules of thrombospondin-1.

Authors:  Yuanyuan Liu; Douglas S Annis; Deane F Mosher
Journal:  J Biol Chem       Date:  2009-06-16       Impact factor: 5.157

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