Literature DB >> 1445229

Bicarbonate-dependent ATP cleavage catalysed by pyruvate carboxylase in the absence of pyruvate.

P V Attwood1, B D Graneri.   

Abstract

Preparations of pyruvate carboxylase catalyse the cleavage of MgATP in the absence of pyruvate and acetyl-CoA. The rate of this cleavage is higher in the presence of HCO3- than in its absence. Incubation of the enzyme preparations with an excess of the pyruvate carboxylase inhibitor, avidin, completely abolishes the pyruvate carboxylating activity of the enzyme preparations but only abolishes the HCO3(-)-dependent MgATP cleaving activity, with no effect on the HCO3(-)-independent ATPase activity. The HCO3(-)-dependent MgATP cleavage is also sensitive to inhibition by a pyruvate carboxylase inhibitor, oxamate, and the dependence of the reaction on the free Mg2+ concentration is similar to that of the pyruvate-carboxylation reaction, whereas the HCO3(-)-independent MgATP cleavage is not dependent on the concentration of free Mg2+ in the range tested. This indicates that MgATP cleavage by pyruvate carboxylase is entirely dependent on the presence of HCO3- and that there may be a low level of ATPase contamination in the enzyme preparations. In addition, inhibition of the HCO3(-)-dependent MgATP cleavage by both avidin and oxamate indicate that although biotin does not directly participate in the reaction, its presence is required in that part of the active site of the enzyme. The rate of HCO3(-)-dependent MgATP cleavage is about 0.07% of that of the full pyruvate carboxylation reaction under similar conditions with saturating substrates. The reaction mechanism is sequential with respect to MgATP and HCO3- addition and Mg2+ adds at equilibrium before MgATP. Acetyl-CoA stimulates the HCO3(-)-dependent MgATP cleavage at low MgATP concentrations, with the stimulation being greater at low Mg2+ concentrations. At high levels of MgATP in the presence of acetyl-CoA, substrate inhibition is evident and is more pronounced at increasing concentrations of Mg2+. This inhibition appears to be, at least in part, caused by inhibition of decarboxylation of the enzyme-carboxybiotin complex by the binding to this complex of Mg2+ and MgATP, which probably act to reduce the rate of movement of carboxybiotin from the site of the MgATP cleavage reaction to that of the pyruvate carboxylation reaction where it is unstable and decarboxylates.

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Year:  1992        PMID: 1445229      PMCID: PMC1133108          DOI: 10.1042/bj2871011

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  25 in total

1.  Approaches to kinetic studies on metal-activated enzymes.

Authors:  J F Morrison
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  Sheep kidney pyruvate carboxylase. Studies on the coupling of adenosine triphosphate hydrolysis and CO2 fixation.

Authors:  L K Ashman; D B Keech
Journal:  J Biol Chem       Date:  1975-01-10       Impact factor: 5.157

3.  A reaction proceeding through intramolecular phosphorylation of a urea. A chemical mechanism for enzymic carboxylation of biotin involving cleavage of adenosines 5'-triphosphate.

Authors:  R Kluger; P D Adawadkar
Journal:  J Am Chem Soc       Date:  1976-06-09       Impact factor: 15.419

Review 4.  The mechanism of biotin-dependent enzymes.

Authors:  J R Knowles
Journal:  Annu Rev Biochem       Date:  1989       Impact factor: 23.643

5.  Decarboxylation of oxalacetate by pyruvate carboxylase.

Authors:  P V Attwood; W W Cleland
Journal:  Biochemistry       Date:  1986-12-16       Impact factor: 3.162

6.  Statistical analysis of enzyme kinetic data.

Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

7.  The carboxybiotin complex of chicken liver pyruvate carboxylase. A kinetic analysis of the effects of acetyl-CoA, Mg2+ ions and temperature on its stability and on its reaction with 2-oxobutyrate.

Authors:  P V Attwood; J C Wallace
Journal:  Biochem J       Date:  1986-04-15       Impact factor: 3.857

8.  Avidin as a probe of the conformational changes induced in pyruvate carboxylase by acetyl-CoA and pyruvate.

Authors:  P V Attwood; F Mayer; J C Wallace
Journal:  FEBS Lett       Date:  1986-07-28       Impact factor: 4.124

9.  Pyruvate carboxylase catalysis of phosphate transfer between carbamoyl phosphate and ADP.

Authors:  P V Attwood; B D Graneri
Journal:  Biochem J       Date:  1991-01-15       Impact factor: 3.857

10.  ATPase activity of biotin carboxylase provides evidence for initial activation of HCO3- by ATP in the carboxylation of biotin.

Authors:  I Climent; V Rubio
Journal:  Arch Biochem Biophys       Date:  1986-12       Impact factor: 4.013

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  17 in total

Review 1.  Structure, function and regulation of pyruvate carboxylase.

Authors:  S Jitrapakdee; J C Wallace
Journal:  Biochem J       Date:  1999-05-15       Impact factor: 3.857

Review 2.  Regulation of the structure and activity of pyruvate carboxylase by acetyl CoA.

Authors:  Abdussalam Adina-Zada; Tonya N Zeczycki; Paul V Attwood
Journal:  Arch Biochem Biophys       Date:  2011-11-19       Impact factor: 4.013

3.  Interaction between the biotin carboxyl carrier domain and the biotin carboxylase domain in pyruvate carboxylase from Rhizobium etli.

Authors:  Adam D Lietzan; Ann L Menefee; Tonya N Zeczycki; Sudhanshu Kumar; Paul V Attwood; John C Wallace; W Wallace Cleland; Martin St Maurice
Journal:  Biochemistry       Date:  2011-10-18       Impact factor: 3.162

4.  Novel insights into the biotin carboxylase domain reactions of pyruvate carboxylase from Rhizobium etli.

Authors:  Tonya N Zeczycki; Ann L Menefee; Abdussalam Adina-Zada; Sarawut Jitrapakdee; Kathy H Surinya; John C Wallace; Paul V Attwood; Martin St Maurice; W Wallace Cleland
Journal:  Biochemistry       Date:  2011-10-13       Impact factor: 3.162

5.  Inhibitors of Pyruvate Carboxylase.

Authors:  Tonya N Zeczycki; Martin St Maurice; Paul V Attwood
Journal:  Open Enzym Inhib J       Date:  2010

6.  Probing the allosteric activation of pyruvate carboxylase using 2',3'-O-(2,4,6-trinitrophenyl) adenosine 5'-triphosphate as a fluorescent mimic of the allosteric activator acetyl CoA.

Authors:  Abdussalam Adina-Zada; Rasmani Hazra; Chutima Sereeruk; Sarawut Jitrapakdee; Tonya N Zeczycki; Martin St Maurice; W Wallace Cleland; John C Wallace; Paul V Attwood
Journal:  Arch Biochem Biophys       Date:  2011-03-21       Impact factor: 4.013

7.  Purification and Characterization of 3-Methylcrotonyl-Coenzyme A Carboxylase from Higher Plant Mitochondria.

Authors:  C. Alban; P. Baldet; S. Axiotis; R. Douce
Journal:  Plant Physiol       Date:  1993-07       Impact factor: 8.340

8.  Isolation and Characterization of Biotin Carboxylase from Pea Chloroplasts.

Authors:  C. Alban; J. Jullien; D. Job; R. Douce
Journal:  Plant Physiol       Date:  1995-11       Impact factor: 8.340

9.  Roles of Arg427 and Arg472 in the binding and allosteric effects of acetyl CoA in pyruvate carboxylase.

Authors:  Abdussalam Adina-Zada; Chutima Sereeruk; Sarawut Jitrapakdee; Tonya N Zeczycki; Martin St Maurice; W Wallace Cleland; John C Wallace; Paul V Attwood
Journal:  Biochemistry       Date:  2012-10-02       Impact factor: 3.162

Review 10.  Structure, mechanism and regulation of pyruvate carboxylase.

Authors:  Sarawut Jitrapakdee; Martin St Maurice; Ivan Rayment; W Wallace Cleland; John C Wallace; Paul V Attwood
Journal:  Biochem J       Date:  2008-08-01       Impact factor: 3.857

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