Literature DB >> 1427821

Human chromosome 8 linkage map based on short tandem repeat polymorphisms: effect of genotyping errors.

J Tomfohrde1, S Wood, M Schertzer, M J Wagner, D E Wells, J Parrish, L A Sadler, S H Blanton, S P Daiger, Z Wang.   

Abstract

A linkage map consisting of 21 dinucleotide repeat polymorphisms, 1 tetranucleotide repeat polymorphism, and 3 RFLPs was constructed for human chromosome 8. The map spanned most of the chromosome length from near pter to q23-q24 on the distal portion of the long arm. The total 186 cM length of the female map was over two times the 84 cM length of the male map. Cytogenetic mapping of the polymorphisms using a panel of hybrids containing rearranged chromosomes was completely consistent with the linkage map. Special effort was made to remove as many genotyping errors, including parental phase errors, as possible. Removal of errors, in agreement with recent theoretical predictions, led to reduction of the total length of the sex-equal map by 10% from 145 to 130 cM.

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Year:  1992        PMID： 1427821     DOI： 10.1016/s0888-7543(05)80297-6

Source DB:  PubMed          Journal:  Genomics        ISSN： 0888-7543            Impact factor:   5.736


  15 in total

1.  Genetic maps of microsatellite and single-nucleotide polymorphism markers: are the distances accurate?

Authors:  Suzanne M Leal
Journal:  Genet Epidemiol       Date:  2003-05       Impact factor: 2.135

2.  Toward localization of the Werner syndrome gene by linkage disequilibrium and ancestral haplotyping: lessons learned from analysis of 35 chromosome 8p11.1-21.1 markers.

Authors:  K A Goddard; C E Yu; J Oshima; T Miki; J Nakura; C Piussan; G M Martin; G D Schellenberg; E M Wijsman
Journal:  Am J Hum Genet       Date:  1996-06       Impact factor: 11.025

3.  Molecular studies of the aetiology of trisomy 8 in spontaneous abortions and the liveborn population.

Authors:  R S James; P A Jacobs
Journal:  Hum Genet       Date:  1996-03       Impact factor: 4.132

4.  Isolation and mapping of microsatellites from a library microdissected from the Werner syndrome region, 8p11.2-p22.

Authors:  K Nagano; J Nakura; K Kihara; L Ye; K Kamino; N Mitsuda; T Ohta; Y Jinno; N Niikawa; T Miki
Journal:  Jpn J Hum Genet       Date:  1993-12

5.  Evidence for human meiotic recombination interference obtained through construction of a short tandem repeat-polymorphism linkage map of chromosome 19.

Authors:  J L Weber; Z Wang; K Hansen; M Stephenson; C Kappel; S Salzman; P J Wilkie; B Keats; N C Dracopoli; B F Brandriff
Journal:  Am J Hum Genet       Date:  1993-11       Impact factor: 11.025

6.  Genetic heterogeneity in families with hereditary multiple exostoses.

Authors:  A Cook; W Raskind; S H Blanton; R M Pauli; R G Gregg; C A Francomano; E Puffenberger; E U Conrad; G Schmale; G Schellenberg
Journal:  Am J Hum Genet       Date:  1993-07       Impact factor: 11.025

7.  Pure chromosome-specific PCR libraries from single sorted chromosomes.

Authors:  D R VanDevanter; N M Choongkittaworn; K A Dyer; J Aten; P Otto; C Behler; E M Bryant; P S Rabinovitch
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-21       Impact factor: 11.205

8.  Deletion mapping of chromosome 8p in colorectal carcinoma and dysplasia arising in ulcerative colitis, prostatic carcinoma, and malignant fibrous histiocytomas.

Authors:  M Chang; K Tsuchiya; R H Batchelor; P S Rabinovitch; B G Kulander; R C Haggitt; G C Burmer
Journal:  Am J Pathol       Date:  1994-01       Impact factor: 4.307

9.  Evidence against DNA polymerase beta as a candidate gene for Werner syndrome.

Authors:  M Chang; G C Burmer; J Sweasy; L A Loeb; S Edelhoff; C M Disteche; C E Yu; L Anderson; J Oshima; J Nakura
Journal:  Hum Genet       Date:  1994-05       Impact factor: 4.132

10.  Refining the region of branchio-oto-renal syndrome and defining the flanking markers on chromosome 8q by genetic mapping.

Authors:  S Kumar; W J Kimberling; C J Connolly; S Tinley; H A Marres; C W Cremers
Journal:  Am J Hum Genet       Date:  1994-12       Impact factor: 11.025
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