Literature DB >> 1392595

A novel light-regulated promoter is conserved in cereal and dicot chloroplasts.

D A Christopher1, M Kim, J E Mullet.   

Abstract

The chloroplast psbD-psbC genes encode D2 and cp43, a reaction center protein and chlorophyll-binding antenna protein of photosystem II, respectively. We have previously shown that differential accumulation of light-induced psbD-psbC mRNAs in barley chloroplasts is due to transcription from a blue light-responsive promoter (LRP). It is hypothesized that the light-induced mRNAs help to maintain levels of the D2 polypeptide, which is photodamaged and degraded in illuminated plants. To determine if light-induced accumulation of psbD-psbC mRNAs was a conserved phenomenon in chloroplasts, the expression of psbD-psbC operons from five cereals (barley, wheat, rice, maize, and sorghum) and three dicot (tobacco, spinach, and pea) species was examined. Cereal and dicot psbD-psbC operons differ due to several DNA rearrangements that moved psbK-psbI proximal to psbD-psbC, allowing cotranscription of these genes and production of several unique transcripts in cereals. Despite differences in the structure and expression of the cereal and dicot psbD-psbC operons, the accumulation of light-induced psbD-psbC mRNAs was conserved in all species studied. An unusual feature of the light-induced mRNAs was the occurrence of 5' end microheterogeneity. The multiple 5' termini were mapped to several consecutive nucleotides (8 to 25 bp) within a highly conserved (61%) DNA region that represents the transcription initiation site for the mRNAs in barley and tobacco. The novel LRP differs in sequence from typical plastid promoters that have prokaryotic "-10" and "-35" elements and is centered 570 bp (cereals), 900 bp (tobacco, spinach), or 1100 bp (pea) upstream from the psbD translational start codon. We propose that physiological and gene regulatory demands of the chloroplast act as constraints that preserved the linkage of the LRP with psbD despite DNA inversions involving the psbD upstream region.

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Year:  1992        PMID: 1392595      PMCID: PMC160174          DOI: 10.1105/tpc.4.7.785

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  33 in total

1.  Sequence and transcriptional analysis of the barley ctDNA region upstream of psbD-psbC encoding trnK(UUU), rps16, trnQ(UUG), psbK, psbI, and trnS(GCU).

Authors:  T Berends Sexton; J T Jones; J E Mullet
Journal:  Curr Genet       Date:  1990-05       Impact factor: 3.886

Review 2.  Light signals in leaf and chloroplast development: photoreceptors and downstream responses in search of a transduction pathway.

Authors:  J Chory
Journal:  New Biol       Date:  1991-06

3.  Alternative promoters are used for genes within maize chloroplast polycistronic transcription units.

Authors:  J Haley; L Bogorad
Journal:  Plant Cell       Date:  1990-04       Impact factor: 11.277

4.  Chlorophyll regulates accumulation of the plastid-encoded chlorophyll apoproteins CP43 and D1 by increasing apoprotein stability.

Authors:  J E Mullet; P G Klein; R R Klein
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

5.  The identification and localization of 33 pea chloroplast transcription initiation sites.

Authors:  N W Woodbury; M Dobres; W F Thompson
Journal:  Curr Genet       Date:  1989-12       Impact factor: 3.886

6.  Function of plastid mRNA 3' inverted repeats. RNA stabilization and gene-specific protein binding.

Authors:  D B Stern; H Jones; W Gruissem
Journal:  J Biol Chem       Date:  1989-11-05       Impact factor: 5.157

7.  Turnover of thylakoid photosystem II proteins during photoinhibition of Chlamydomonas reinhardtii.

Authors:  G Schuster; R Timberg; I Ohad
Journal:  Eur J Biochem       Date:  1988-11-01

8.  The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.

Authors:  J Hiratsuka; H Shimada; R Whittier; T Ishibashi; M Sakamoto; M Mori; C Kondo; Y Honji; C R Sun; B Y Meng
Journal:  Mol Gen Genet       Date:  1989-06

9.  In vitro transcription and DNA binding characteristics of chloroplast and etioplast extracts from mustard (Sinapis alba) indicate differential usage of the psbA promoter.

Authors:  A Eisermann; K Tiller; G Link
Journal:  EMBO J       Date:  1990-12       Impact factor: 11.598

10.  Light regulated translational activators: identification of chloroplast gene specific mRNA binding proteins.

Authors:  A Danon; S P Mayfield
Journal:  EMBO J       Date:  1991-12       Impact factor: 11.598

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  32 in total

1.  Motif analysis unveils the possible co-regulation of chloroplast genes and nuclear genes encoding chloroplast proteins.

Authors:  Ying Wang; Jun Ding; Henry Daniell; Haiyan Hu; Xiaoman Li
Journal:  Plant Mol Biol       Date:  2012-06-26       Impact factor: 4.076

2.  Deletion of rpoB reveals a second distinct transcription system in plastids of higher plants.

Authors:  L A Allison; L D Simon; P Maliga
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

3.  Cryptochrome 1, cryptochrome 2, and phytochrome a co-activate the chloroplast psbD blue light-responsive promoter.

Authors:  K E Thum; M Kim; D A Christopher; J E Mullet
Journal:  Plant Cell       Date:  2001-12       Impact factor: 11.277

4.  Characterization of dynamics of the psbD light-induced transcription in mature wheat chloroplasts.

Authors:  J Satoh; K Baba; Y Nakahira; T Shiina; Y Toyoshima
Journal:  Plant Mol Biol       Date:  1997-01       Impact factor: 4.076

5.  A ribosomal protein gene (rpl32) from tobacco chloroplast DNA is transcribed from alternative promoters: similarities in promoter region organization in plastid housekeeping genes.

Authors:  A Vera; T Hirose; M Sugiura
Journal:  Mol Gen Genet       Date:  1996-07-19

6.  Plastid Gene Transcription: An Update on Promoters and RNA Polymerases.

Authors:  Jennifer Ortelt; Gerhard Link
Journal:  Methods Mol Biol       Date:  2021

7.  MoChlo: A Versatile, Modular Cloning Toolbox for Chloroplast Biotechnology.

Authors:  Alessandro Occhialini; Agnieszka A Piatek; Alexander C Pfotenhauer; Taylor P Frazier; C Neal Stewart; Scott C Lenaghan
Journal:  Plant Physiol       Date:  2019-01-24       Impact factor: 8.340

8.  In Vitro Analysis of Light-Induced Transcription in the Wheat psbD/C Gene Cluster Using Plastid Extracts from Dark-Grown and Short-Term-Illuminated Seedlings.

Authors:  T. Wada; Y. Tunoyama; T. Shiina; Y. Toyoshima
Journal:  Plant Physiol       Date:  1994-04       Impact factor: 8.340

9.  Differential Transcription of Pea Chloroplast Genes during Light-Induced Leaf Development (Continuous Far-Red Light Activates Chloroplast Transcription).

Authors:  A. N. DuBell; J. E. Mullet
Journal:  Plant Physiol       Date:  1995-09       Impact factor: 8.340

10.  Blue light-induced transcription of plastid-encoded psbD gene is mediated by a nuclear-encoded transcription initiation factor, AtSig5.

Authors:  Yuichi Tsunoyama; Yoko Ishizaki; Kazuya Morikawa; Maki Kobori; Yoichi Nakahira; Go Takeba; Yoshinori Toyoshima; Takashi Shiina
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-19       Impact factor: 11.205

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