Literature DB >> 7596350

Control theory of metabolic channelling.

B N Kholodenko1, M Cascante, H V Westerhoff.   

Abstract

Various factors appear to control muscle energetics, often in conjunction. This calls for a quantitative approach of the type provided by Metabolic Control Analysis for intermediary metabolism and mitochondrial oxidative phosphorylation. To the extent that direct transfer of high energy phosphates and spatial organization plays a role in muscle energetics however, the standard Metabolic Control Theory does not apply, neither do its theorems regarding control. This paper develops the Control Theory that does apply to the muscle system. It shows that direct transfer of high energy phosphates bestows a system with enhanced control: the sum of the control exerted by the participating enzymes on the flux of free energy from the mitochondrial matrix to the actinomyosin may well exceed the 100% mandatory for ideal metabolic pathways. It is also shown how sequestration of high energy phosphates may allow for negative control on pathway flux. The new control theory gives method functionally to diagnose the extent to which channelling and metabolite sequestration occur.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 7596350     DOI: 10.1007/BF01816949

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  45 in total

1.  Control of the metabolic flux in a system with high enzyme concentrations and moiety-conserved cycles. The sum of the flux control coefficients can drop significantly below unity.

Authors:  B N Kholodenko; A E Lyubarev; B I Kurganov
Journal:  Eur J Biochem       Date:  1992-11-15

2.  Metabolite channelling in aerobic energy metabolism.

Authors:  M Wyss; T Wallimann
Journal:  J Theor Biol       Date:  1992-09-07       Impact factor: 2.691

Review 3.  Enzyme-enzyme interactions and control analysis. 2. The case of non-independence: heterologous associations.

Authors:  H M Sauro; H Kacser
Journal:  Eur J Biochem       Date:  1990-02-14

Review 4.  Enzyme-enzyme interactions and control analysis. 1. The case of non-additivity: monomer-oligomer associations.

Authors:  H Kacser; H M Sauro; L Acerenza
Journal:  Eur J Biochem       Date:  1990-02-14

Review 5.  Complexes of sequential metabolic enzymes.

Authors:  P A Srere
Journal:  Annu Rev Biochem       Date:  1987       Impact factor: 23.643

6.  A linear steady-state treatment of enzymatic chains. General properties, control and effector strength.

Authors:  R Heinrich; T A Rapoport
Journal:  Eur J Biochem       Date:  1974-02-15

7.  The sum of the control coefficients of all enzymes on the flux through a group-transfer pathway can be as high as two.

Authors:  K van Dam; J van der Vlag; B N Kholodenko; H V Westerhoff
Journal:  Eur J Biochem       Date:  1993-03-15

8.  Control of the flux in the arginine pathway of Neurospora crassa. Modulations of enzyme activity and concentration.

Authors:  H J Flint; R W Tateson; I B Barthelmess; D J Porteous; W D Donachie; H Kacser
Journal:  Biochem J       Date:  1981-11-15       Impact factor: 3.857

9.  Metabolic control and its analysis. Additional relationships between elasticities and control coefficients.

Authors:  D A Fell; H M Sauro
Journal:  Eur J Biochem       Date:  1985-05-02

10.  Excess capacity of H(+)-ATPase and inverse respiratory control in Escherichia coli.

Authors:  P R Jensen; H V Westerhoff; O Michelsen
Journal:  EMBO J       Date:  1993-04       Impact factor: 11.598

View more
  5 in total

1.  Signaling through receptors and scaffolds: independent interactions reduce combinatorial complexity.

Authors:  Nikolay M Borisov; Nick I Markevich; Jan B Hoek; Boris N Kholodenko
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

2.  Systems biology towards life in silico: mathematics of the control of living cells.

Authors:  Hans V Westerhoff; Alexey Kolodkin; Riaan Conradie; Stephen J Wilkinson; Frank J Bruggeman; Klaas Krab; Jan H van Schuppen; Hanna Hardin; Barbara M Bakker; Martijn J Moné; Katja N Rybakova; Marco Eijken; Hans J P van Leeuwen; Jacky L Snoep
Journal:  J Math Biol       Date:  2008-02-16       Impact factor: 2.259

3.  Subtleties in control by metabolic channelling and enzyme organization.

Authors:  B N Kholodenko; J M Rohwer; M Cascante; H V Westerhoff
Journal:  Mol Cell Biochem       Date:  1998-07       Impact factor: 3.396

4.  Implications of macromolecular crowding for signal transduction and metabolite channeling.

Authors:  J M Rohwer; P W Postma; B N Kholodenko; H V Westerhoff
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

Review 5.  Synthetic biology and regulatory networks: where metabolic systems biology meets control engineering.

Authors:  Fei He; Ettore Murabito; Hans V Westerhoff
Journal:  J R Soc Interface       Date:  2016-04-13       Impact factor: 4.118

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.