Literature DB >> 1384711

Transfer RNA genes from the hyperthermophilic Archaeon, Methanopyrus kandleri.

J R Palmer1, T Baltrus, J N Reeve, C J Daniels.   

Abstract

Genes encoding the Leu (GAG), Ser (UGA), Gln (UUG) and Lys (UUU) tRNAs have been cloned and sequenced from the deep sea hyperthermophilic Archaeon, Methanopyrus kandleri. Sequences conforming to the TATA box element established for methanogen promoters are located upstream of the tRNA(Gln) and tRNA(Lys) genes. All four of the tRNA genes appear to encode the 3' terminal CCA residues of the mature tRNA. These methanogen tRNAs are predicted to contain most, but not all, invariant residues and are characterized by a high level of G + C base pairing, consistent with the 98 degrees C optimum growth temperature of M. kandleri.

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Year:  1992        PMID: 1384711     DOI: 10.1016/0167-4781(92)90168-y

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

1.  Structural and mutational analysis of tRNA intron-splicing endonuclease from Thermoplasma acidophilum DSM 1728: catalytic mechanism of tRNA intron-splicing endonucleases.

Authors:  Young Kwan Kim; Kenji Mizutani; Kyung-Hee Rhee; Ki-Hyun Nam; Won Ho Lee; Eun Hye Lee; Eunice Eunkyeong Kim; Sam-Yong Park; Kwang Yeon Hwang
Journal:  J Bacteriol       Date:  2007-09-07       Impact factor: 3.490

Review 2.  Transfer RNA processing in archaea: unusual pathways and enzymes.

Authors:  Ilka U Heinemann; Dieter Söll; Lennart Randau
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

Review 3.  Phylogeny from function: evidence from the molecular fossil record that tRNA originated in replication, not translation.

Authors:  N Maizels; A M Weiner
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

4.  A cytidine deaminase edits C to U in transfer RNAs in Archaea.

Authors:  Lennart Randau; Bradford J Stanley; Andrew Kohlway; Sarah Mechta; Yong Xiong; Dieter Söll
Journal:  Science       Date:  2009-05-01       Impact factor: 47.728

5.  RNA-Seq analyses reveal the order of tRNA processing events and the maturation of C/D box and CRISPR RNAs in the hyperthermophile Methanopyrus kandleri.

Authors:  Andreas A H Su; Vanessa Tripp; Lennart Randau
Journal:  Nucleic Acids Res       Date:  2013-04-25       Impact factor: 16.971

  5 in total

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