Literature DB >> 1384053

A phylogenetic analysis of the myxobacteria: basis for their classification.

L Shimkets1, C R Woese.   

Abstract

The primary sequence and secondary structural features of the 16S rRNA were compared for 12 different myxobacteria representing all the known cultivated genera. Analysis of these data show the myxobacteria to form a monophyletic grouping consisting of three distinct families, which lies within the delta subdivision of the purple bacterial phylum. The composition of the families is consistent with differences in cell and spore morphology, cell behavior, and pigment and secondary metabolite production but is not correlated with the morphological complexity of the fruiting bodies. The Nannocystis exedens lineage has evolved at an unusually rapid pace and its rRNA shows numerous primary and secondary structural idiosyncrasies.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1992        PMID: 1384053      PMCID: PMC50151          DOI: 10.1073/pnas.89.20.9459

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  11 in total

1.  The Main Outlines of Bacterial Classification.

Authors:  R Y Stanier; C B Van Niel
Journal:  J Bacteriol       Date:  1941-10       Impact factor: 3.490

Review 2.  Social and developmental biology of the myxobacteria.

Authors:  L J Shimkets
Journal:  Microbiol Rev       Date:  1990-12

3.  Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.

Authors:  D J Lane; B Pace; G J Olsen; D A Stahl; M L Sogin; N R Pace
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

Review 4.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

5.  Higher order structural elements in ribosomal RNAs: pseudo-knots and the use of noncanonical pairs.

Authors:  R R Gutell; C R Woese
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

6.  A comparison of the 16S ribosomal RNAs from mesophilic and thermophilic bacilli: some modifications in the Sanger method for RNA sequencing.

Authors:  C Woese; M Sogin; D Stahl; B J Lewis; L Bonen
Journal:  J Mol Evol       Date:  1976-04-09       Impact factor: 2.395

Review 7.  Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids.

Authors:  C R Woese; R Gutell; R Gupta; H F Noller
Journal:  Microbiol Rev       Date:  1983-12

8.  Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination.

Authors:  M D Biggin; T J Gibson; G F Hong
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

9.  A phylogenetic analysis of the mycoplasmas: basis for their classification.

Authors:  W G Weisburg; J G Tully; D L Rose; J P Petzel; H Oyaizu; D Yang; L Mandelco; J Sechrest; T G Lawrence; J Van Etten
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  31 in total

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Authors:  Francesca Fiegna; Gregory J Velicer
Journal:  Proc Biol Sci       Date:  2003-07-22       Impact factor: 5.349

2.  Steroids, triterpenoids and molecular oxygen.

Authors:  Roger E Summons; Alexander S Bradley; Linda L Jahnke; Jacob R Waldbauer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-06-29       Impact factor: 6.237

3.  Grouping myxococci (Corallococcus) strains by Matrix-Assisted Laser Desorption Ionization Time-of-Flight (MALDI TOF) mass spectrometry: comparison with gene sequence phylogenies.

Authors:  Erko Stackebrandt; Orsola Päuker; Marcel Erhard
Journal:  Curr Microbiol       Date:  2005-02-03       Impact factor: 2.188

4.  Myxobacterial biodiversity in an established oak-hickory forest and a savanna restoration site.

Authors:  R Brock Neil; Dan Hite; Michael I Kelrick; Michael L Lockhart; Keesoo Lee
Journal:  Curr Microbiol       Date:  2005-02-03       Impact factor: 2.188

5.  Temperate Myxococcus xanthus phage Mx8 encodes a DNA adenine methylase, Mox.

Authors:  V Magrini; D Salmi; D Thomas; S K Herbert; P L Hartzell; P Youderian
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

6.  Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii.

Authors:  C L Moyer; F C Dobbs; D M Karl
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

Review 7.  Structure, function, and evolution of bacterial reverse transcriptase.

Authors:  S Inouye; M Inouye
Journal:  Virus Genes       Date:  1995       Impact factor: 2.332

Review 8.  Recent advances in the social and developmental biology of the myxobacteria.

Authors:  M Dworkin
Journal:  Microbiol Rev       Date:  1996-03

9.  Genetic determinants of immunity and integration of temperate Myxococcus xanthus phage Mx8.

Authors:  D Salmi; V Magrini; P L Hartzell; P Youderian
Journal:  J Bacteriol       Date:  1998-02       Impact factor: 3.490

10.  Characterization of Fe(III) reduction by chlororespiring Anaeromyxobacter dehalogenans.

Authors:  Qiang He; Robert A Sanford
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

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