Literature DB >> 1339022

Differences in hydrogen exchange behavior between the oxidized and reduced forms of Escherichia coli thioredoxin.

S M Kaminsky1, F M Richards.   

Abstract

Amide proton exchange of thioredoxin is used to monitor the structural effects of reduction of its single disulfide. An effective 3-5-proton difference between the oxidized and reduced protein form is observed early in proton out-exchange of the whole protein, which is independent of temperature in the range of 5-45 degrees C, indicating that redox-sensitive changes are probably not due to low-energy structural fluctuations. Medium resolution hydrogen exchange experiments have localized the redox-sensitive amide protons to two parts of the sequence that are distant from each other in the three-dimensional structure: the active-site turn and the first beta-strand. The sum of the proton differences observed in the peptides from these regions is equal to that of the whole protein, indicating that all redox-sensitive hydrogen exchange effects are observed in the peptide experiments. A model combining structural changes within the protein matrix with changes in the surface hydration properties is proposed as a mechanism for the communication between distant sites within the protein. Sound velocity and density measurements of reduced and oxidized thioredoxin are presented in the accompanying paper (Kaminsky, S.M. & Richards, F.M., 1992, Protein Sci. 1, 22-30).

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Year:  1992        PMID: 1339022      PMCID: PMC2142074          DOI: 10.1002/pro.5560010103

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  27 in total

1.  Reduction of thioredoxin significantly decreases its partial specific volume and adiabatic compressibility.

Authors:  S M Kaminsky; F M Richards
Journal:  Protein Sci       Date:  1992-01       Impact factor: 6.725

2.  Activation of the dynein adenosinetriphosphatase by cross-linking to microtubules.

Authors:  T Shimizu; S P Marchese-Ragona; K A Johnson
Journal:  Biochemistry       Date:  1989-08-22       Impact factor: 3.162

3.  Protein hydrogen exchange studied by the fragment separation method.

Authors:  J J Englander; J R Rogero; S W Englander
Journal:  Anal Biochem       Date:  1985-05-15       Impact factor: 3.365

Review 4.  Mechanisms of cooperativity and allosteric regulation in proteins.

Authors:  M F Perutz
Journal:  Q Rev Biophys       Date:  1989-05       Impact factor: 5.318

5.  Effects of ATP and CTP on the conformation of the regulatory subunit of Escherichia coli aspartate transcarbamylase in solution: a medium-resolution hydrogen exchange study.

Authors:  D Mallikarachchi; D S Burz; N M Allewell
Journal:  Biochemistry       Date:  1989-06-27       Impact factor: 3.162

6.  Spectroscopic characterization of thioredoxin covalently modified with monofunctional organoarsenical reagents.

Authors:  S B Brown; R J Turner; R S Roche; K J Stevenson
Journal:  Biochemistry       Date:  1987-02-10       Impact factor: 3.162

Review 7.  Thioredoxin.

Authors:  A Holmgren
Journal:  Annu Rev Biochem       Date:  1985       Impact factor: 23.643

8.  Hydrogen exchange from identified regions of the S-protein component of ribonuclease as a function of temperature, pH, and the binding of S-peptide.

Authors:  J H Rosa; F M Richards
Journal:  J Mol Biol       Date:  1981-02-05       Impact factor: 5.469

9.  Allosteric energy at the hemoglobin beta chain C terminus studied by hydrogen exchange.

Authors:  G Louie; T Tran; J J Englander; S W Englander
Journal:  J Mol Biol       Date:  1988-06-20       Impact factor: 5.469

10.  NMR sequential assignment of Escherichia coli thioredoxin utilizing random fractional deuteriation.

Authors:  D M LeMaster; F M Richards
Journal:  Biochemistry       Date:  1988-01-12       Impact factor: 3.162

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  5 in total

Review 1.  Protein compressibility, dynamics, and pressure.

Authors:  D P Kharakoz
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

2.  Reduction of thioredoxin significantly decreases its partial specific volume and adiabatic compressibility.

Authors:  S M Kaminsky; F M Richards
Journal:  Protein Sci       Date:  1992-01       Impact factor: 6.725

3.  Probing high order structure of proteins by fast-atom bombardment mass spectrometry.

Authors:  Y Liu; D L Smith
Journal:  J Am Soc Mass Spectrom       Date:  1994-01       Impact factor: 3.109

Review 4.  Mechanisms and uses of hydrogen exchange.

Authors:  S W Englander; T R Sosnick; J J Englander; L Mayne
Journal:  Curr Opin Struct Biol       Date:  1996-02       Impact factor: 6.809

5.  Redox-dependent dynamics of a dual thioredoxin fold protein: evolution of specialized folds.

Authors:  Andrea Hall; Derek Parsonage; David Horita; P Andrew Karplus; Leslie B Poole; Elisar Barbar
Journal:  Biochemistry       Date:  2009-06-30       Impact factor: 3.162

  5 in total

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