Literature DB >> 13129953

Role of 2-phosphoglycolate phosphatase of Escherichia coli in metabolism of the 2-phosphoglycolate formed in DNA repair.

Maria Teresa Pellicer1, Maria Felisa Nuñez, Juan Aguilar, Josefa Badia, Laura Baldoma.   

Abstract

The enzyme 2-phosphoglycolate phosphatase from Escherichia coli, encoded by the gph gene, was purified and characterized. The enzyme was highly specific for 2-phosphoglycolate and showed good catalytic efficiency (k(cat)/K(m)), which enabled the conversion of this substrate even at low intracellular concentrations. A comparison of the structural and functional features of this enzyme with those of 2-phosphoglycolate phosphatases of different origins showed a high similarity of the sequences, implying the use of the same catalytic mechanism. Western blot analysis revealed constitutive expression of the gph gene, regardless of the carbon source used, growth stage, or oxidative stress conditions. We showed that this housekeeping enzyme is involved in the dissimilation of the intracellular 2-phosphoglycolate formed in the DNA repair of 3'-phosphoglycolate ends. DNA strand breaks of this kind are caused by agents such as the radiomimetic compound bleomycin. The differential response between a 2-phosphoglycolate phosphatase-deficient mutant and its parental strain after treatment with bleomycin allowed us to connect the intracellular formation of 2-phosphoglycolate with the production of glycolate, which is subsequently incorporated into general metabolism. We thus provide evidence for a salvage function of 2-phosphoglycolate phosphatase in the metabolism of a two-carbon compound generated by the cellular DNA repair machinery.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 13129953      PMCID: PMC193966          DOI: 10.1128/JB.185.19.5815-5821.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  35 in total

1.  Phosphoglycolate phosphatase. Purification and properties.

Authors:  J T Christeller; N E Tolbert
Journal:  J Biol Chem       Date:  1978-03-25       Impact factor: 5.157

2.  The complete genome sequence of Escherichia coli K-12.

Authors:  F R Blattner; G Plunkett; C A Bloch; N T Perna; V Burland; M Riley; J Collado-Vides; J D Glasner; C K Rode; G F Mayhew; J Gregor; N W Davis; H A Kirkpatrick; M A Goeden; D J Rose; B Mau; Y Shao
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

Review 4.  Repair of oxidative damage to DNA: enzymology and biology.

Authors:  B Demple; L Harrison
Journal:  Annu Rev Biochem       Date:  1994       Impact factor: 23.643

5.  Cloning and characterization of the gene for Escherichia coli tryptophanyl-transfer ribonucleic acid synthetase.

Authors:  C V Hall; C Yanofsky
Journal:  J Bacteriol       Date:  1981-12       Impact factor: 3.490

6.  Rhamnose-induced propanediol oxidoreductase in Escherichia coli: purification, properties, and comparison with the fucose-induced enzyme.

Authors:  A Boronat; J Aguilar
Journal:  J Bacteriol       Date:  1979-11       Impact factor: 3.490

7.  Unusual ribulose 1,5-bisphosphate carboxylase/oxygenase of anoxic Archaea.

Authors:  G M Watson; J P Yu; F R Tabita
Journal:  J Bacteriol       Date:  1999-03       Impact factor: 3.490

8.  The Escherichia coli dam gene is expressed as a distal gene of a new operon.

Authors:  P Jonczyk; R Hines; D W Smith
Journal:  Mol Gen Genet       Date:  1989-05

9.  The cbb operons of the facultative chemoautotroph Alcaligenes eutrophus encode phosphoglycolate phosphatase.

Authors:  J Schäferjohann; J G Yoo; B Kusian; B Bowien
Journal:  J Bacteriol       Date:  1993-11       Impact factor: 3.490

10.  Characterization of three genes in the dam-containing operon of Escherichia coli.

Authors:  A Lyngstadaas; A Løbner-Olesen; E Boye
Journal:  Mol Gen Genet       Date:  1995-06-10
View more
  21 in total

1.  Genes involved in intrinsic antibiotic resistance of Acinetobacter baylyi.

Authors:  Maria J Gomez; Alexander A Neyfakh
Journal:  Antimicrob Agents Chemother       Date:  2006-08-28       Impact factor: 5.191

2.  Overexpression, purification, characterization and preliminary crystallographic study of phosphoglycolate phosphatase from Shigella flexneri 2a strain 301.

Authors:  Heli Liu; Huina Zhou; Deyu Zhu; Ruchang Bi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-12-25

3.  Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage.

Authors:  Chelsea L Murphy; Noha H Youssef; Radwa A Hanafy; M B Couger; Jason E Stajich; Yan Wang; Kristina Baker; Sumit S Dagar; Gareth W Griffith; Ibrahim F Farag; T M Callaghan; Mostafa S Elshahed
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

4.  Functional Diversity of Haloacid Dehalogenase Superfamily Phosphatases from Saccharomyces cerevisiae: BIOCHEMICAL, STRUCTURAL, AND EVOLUTIONARY INSIGHTS.

Authors:  Ekaterina Kuznetsova; Boguslaw Nocek; Greg Brown; Kira S Makarova; Robert Flick; Yuri I Wolf; Anna Khusnutdinova; Elena Evdokimova; Ke Jin; Kemin Tan; Andrew D Hanson; Ghulam Hasnain; Rémi Zallot; Valérie de Crécy-Lagard; Mohan Babu; Alexei Savchenko; Andrzej Joachimiak; Aled M Edwards; Eugene V Koonin; Alexander F Yakunin
Journal:  J Biol Chem       Date:  2015-06-12       Impact factor: 5.157

5.  Directed evolution of RuBisCO hypermorphs through genetic selection in engineered E.coli.

Authors:  Monal R Parikh; Dina N Greene; Kristen K Woods; Ichiro Matsumura
Journal:  Protein Eng Des Sel       Date:  2006-01-19       Impact factor: 1.650

Review 6.  Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles.

Authors:  John A Raven; Mario Giordano; John Beardall; Stephen C Maberly
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-02-19       Impact factor: 6.237

7.  Phosphoglycolate phosphatase is a metabolic proofreading enzyme essential for cellular function in Plasmodium berghei.

Authors:  Lakshmeesha Kempaiah Nagappa; Pardhasaradhi Satha; Thimmaiah Govindaraju; Hemalatha Balaram
Journal:  J Biol Chem       Date:  2019-01-30       Impact factor: 5.157

8.  Specific gene responses of Rhodococcus jostii RHA1 during growth in soil.

Authors:  Toju Iino; Yong Wang; Keisuke Miyauchi; Daisuke Kasai; Eiji Masai; Takeshi Fujii; Naoto Ogawa; Masao Fukuda
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

9.  Functional reconstitution of a bacterial CO2 concentrating mechanism in Escherichia coli.

Authors:  Avi I Flamholz; Eli Dugan; Cecilia Blikstad; Shmuel Gleizer; Roee Ben-Nissan; Shira Amram; Niv Antonovsky; Sumedha Ravishankar; Elad Noor; Arren Bar-Even; Ron Milo; David F Savage
Journal:  Elife       Date:  2020-10-21       Impact factor: 8.140

10.  A chemical biology approach to interrogate quorum-sensing regulated behaviors at the molecular and cellular level.

Authors:  Colin A Lowery; Susana Matamouros; Sherry Niessen; Jie Zhu; Jonathan Scolnick; Jenny M Lively; Benjamin F Cravatt; Samuel I Miller; Gunnar F Kaufmann; Kim D Janda
Journal:  Chem Biol       Date:  2013-07-25
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.