Literature DB >> 1304886

Peptide models of the Tat-TAR protein-RNA interaction.

A D Frankel1.   

Abstract

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Year:  1992        PMID： 1304886      PMCID： PMC2142144          DOI： 10.1002/pro.5560011202

Source DB:  PubMed          Journal:  Protein Sci        ISSN： 0961-8368            Impact factor:   6.725


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  19 in total

1.  Two distinct nuclear transcription factors recognize loop and bulge residues of the HIV-1 TAR RNA hairpin.

Authors:  C T Sheline; L H Milocco; K A Jones
Journal:  Genes Dev       Date:  1991-12       Impact factor: 11.361

2.  tat regulates binding of the human immunodeficiency virus trans-activating region RNA loop-binding protein TRP-185.

Authors:  F Wu; J Garcia; D Sigman; R Gaynor
Journal:  Genes Dev       Date:  1991-11       Impact factor: 11.361

3.  Analysis of arginine-rich peptides from the HIV Tat protein reveals unusual features of RNA-protein recognition.

Authors:  B J Calnan; S Biancalana; D Hudson; A D Frankel
Journal:  Genes Dev       Date:  1991-02       Impact factor: 11.361

4.  RNA recognition by Tat-derived peptides: interaction in the major groove?

Authors:  K M Weeks; D M Crothers
Journal:  Cell       Date:  1991-08-09       Impact factor: 41.582

5.  Detailed mutational analysis of TAR RNA: critical spacing between the bulge and loop recognition domains.

Authors:  B Berkhout; K T Jeang
Journal:  Nucleic Acids Res       Date:  1991-11-25       Impact factor: 16.971

6.  Specific binding of arginine to TAR RNA.

Authors:  J Tao; A D Frankel
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-01       Impact factor: 11.205

7.  Conformation of the TAR RNA-arginine complex by NMR spectroscopy.

Authors:  J D Puglisi; R Tan; B J Calnan; A D Frankel; J R Williamson
Journal:  Science       Date:  1992-07-03       Impact factor: 47.728

8.  Arginine-mediated RNA recognition: the arginine fork.

Authors:  B J Calnan; B Tidor; S Biancalana; D Hudson; A D Frankel
Journal:  Science       Date:  1991-05-24       Impact factor: 47.728

9.  Folding transition in the DNA-binding domain of GCN4 on specific binding to DNA.

Authors:  M A Weiss; T Ellenberger; C R Wobbe; J P Lee; S C Harrison; K Struhl
Journal:  Nature       Date:  1990-10-11       Impact factor: 49.962

10.  Conformation of an RNA pseudoknot.

Authors:  J D Puglisi; J R Wyatt; I Tinoco
Journal:  J Mol Biol       Date:  1990-07-20       Impact factor: 5.469
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  10 in total

1.  Comparative analysis of RNA/protein dynamics for the arginine-rich-binding motif and zinc-finger-binding motif proteins encoded by HIV-1.

Authors:  Hui Wang; Xiaojing Ma; Yu-Shan Yeh; Yongjin Zhu; Matthew D Daugherty; Alan D Frankel; Karin Musier-Forsyth; Paul F Barbara
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

2.  A functional peptide encoded in the Escherichia coli 23S rRNA.

Authors:  T Tenson; A DeBlasio; A Mankin
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

3.  The folding competence of HIV-1 Tat mediated by interaction with TAR RNA.

Authors:  Jung Min Kim; Hee Sun Choi; Baik Lin Seong
Journal:  RNA Biol       Date:  2017-04-18       Impact factor: 4.652

4.  Recognition of 5'-terminal TAR structure in human immunodeficiency virus-1 mRNA by eukaryotic translation initiation factor 2.

Authors:  Y Ben-Asouli; Y Banai; H Hauser; R Kaempfer
Journal:  Nucleic Acids Res       Date:  2000-02-15       Impact factor: 16.971

5.  Design and synthesis of RNA miniduplexes via a synthetic linker approach. 2. Generation of covalently closed, double-stranded cyclic HIV-1 TAR RNA analogs with high Tat-binding affinity.

Authors:  M Y X Ma; K McCallum; S C Climie; R Kuperman; W C Lin; M Sumner-Smith; R W Barnett
Journal:  Nucleic Acids Res       Date:  1993-06-11       Impact factor: 16.971

6.  Identification of a novel HIV-1 TAR RNA bulge binding protein.

Authors:  B Baker; M Muckenthaler; E Vives; A Blanchard; M Braddock; W Nacken; A J Kingsman; S M Kingsman
Journal:  Nucleic Acids Res       Date:  1994-08-25       Impact factor: 16.971

7.  Interactions of Protonated Guanidine and Guanidine Derivatives with Multiply Deprotonated RNA Probed by Electrospray Ionization and Collisionally Activated Dissociation.

Authors:  Jovana Vušurović; Eva-Maria Schneeberger; Kathrin Breuker
Journal:  ChemistryOpen       Date:  2017-10-24       Impact factor: 2.911

8.  The nuclear transcription factor, TAF7, is a cytoplasmic regulator of protein synthesis.

Authors:  Dan Cheng; Kevin Semmens; Elizabeth McManus; Qingrong Chen; Daoud Meerzaman; Xiantao Wang; Markus Hafner; Brian A Lewis; Hidehisa Takahashi; Ballachanda N Devaiah; Anne Gegonne; Dinah S Singer
Journal:  Sci Adv       Date:  2021-12-10       Impact factor: 14.136

9.  Thermodynamic studies of a series of homologous HIV-1 TAR RNA ligands reveal that loose binders are stronger Tat competitors than tight ones.

Authors:  Lise Pascale; Stéphane Azoulay; Audrey Di Giorgio; Laura Zenacker; Marc Gaysinski; Pascal Clayette; Nadia Patino
Journal:  Nucleic Acids Res       Date:  2013-04-19       Impact factor: 16.971

10.  A novel combined RNA-protein interaction analysis distinguishes HIV-1 Gag protein binding sites from structural change in the viral RNA leader.

Authors:  Julia C Kenyon; Liam J Prestwood; Andrew M L Lever
Journal:  Sci Rep       Date:  2015-10-09       Impact factor: 4.379
  10 in total

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